X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fschemes%2FTurnColourScheme.java;h=7d8035a76d9e4e2428e8fa0c4dcc75c2e5067f93;hb=HEAD;hp=ed56018aa99a0bf1a999d6bc241d70e52e553d3d;hpb=d423f22792e47dbc800ae220a58677f988971d06;p=jalview.git diff --git a/src/jalview/schemes/TurnColourScheme.java b/src/jalview/schemes/TurnColourScheme.java index ed56018..7d8035a 100755 --- a/src/jalview/schemes/TurnColourScheme.java +++ b/src/jalview/schemes/TurnColourScheme.java @@ -1,23 +1,29 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5) - * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - * + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.schemes; -import java.awt.*; +import jalview.api.AlignViewportI; +import jalview.datamodel.AnnotatedCollectionI; + +import java.awt.Color; /** * DOCUMENT ME! @@ -32,8 +38,8 @@ public class TurnColourScheme extends ScoreColourScheme */ public TurnColourScheme() { - super(ResidueProperties.turn, ResidueProperties.turnmin, - ResidueProperties.turnmax); + super(ResidueProperties.aaIndex, ResidueProperties.turn, + ResidueProperties.turnmin, ResidueProperties.turnmax); } /** @@ -44,8 +50,32 @@ public class TurnColourScheme extends ScoreColourScheme * * @return DOCUMENT ME! */ + @Override public Color makeColour(float c) { return new Color(c, 1 - c, 1 - c); } + + @Override + public boolean isPeptideSpecific() + { + return true; + } + + @Override + public String getSchemeName() + { + return JalviewColourScheme.Turn.toString(); + } + + /** + * Returns a new instance of this colour scheme with which the given data may + * be coloured + */ + @Override + public ColourSchemeI getInstance(AlignViewportI view, + AnnotatedCollectionI coll) + { + return new TurnColourScheme(); + } }