X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fstructure%2FSecondaryStructureListener.java;h=c8be34c21ae684a92952dfef4744988aac82957b;hb=9876fdccf311378e690c1f9e18db52675d427b89;hp=4ae917a4a94e8d48a6fedf605e6ae477155b37b2;hpb=bfa1ec36b19342ccdced621509f78dc527c3ad18;p=jalview.git
diff --git a/src/jalview/structure/SecondaryStructureListener.java b/src/jalview/structure/SecondaryStructureListener.java
index 4ae917a..c8be34c 100644
--- a/src/jalview/structure/SecondaryStructureListener.java
+++ b/src/jalview/structure/SecondaryStructureListener.java
@@ -1,25 +1,39 @@
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
+ * Copyright (C) 2015 The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- *
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.structure;
-import jalview.datamodel.*;
+import jalview.datamodel.SequenceI;
public interface SecondaryStructureListener
{
- public void mouseOverSequence(SequenceI sequence, int index);
+ // TODO - redefine to allow RNA mouseovers to be passed back correctly to
+ // listeners
+ /**
+ * act on a mouseover event
+ *
+ * @param sequence
+ * @param index
+ * the aligned sequence position (base 0)
+ * @param position
+ * the dataset sequence position (base 1)
+ */
+ public void mouseOverSequence(SequenceI sequence, int index, int position);
}