X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fstructure%2FSequenceListener.java;h=771b8a0f5490783ba2e8617bd71173e9aca75f3e;hb=refs%2Fheads%2Freleases%2FRelease_2_10_0_Branch;hp=bda215e6f63be35b22124cc7f41cd1d294c5ba76;hpb=3173d5515901341a2ae3211bd8e4400e966add35;p=jalview.git

diff --git a/src/jalview/structure/SequenceListener.java b/src/jalview/structure/SequenceListener.java
index bda215e..771b8a0 100644
--- a/src/jalview/structure/SequenceListener.java
+++ b/src/jalview/structure/SequenceListener.java
@@ -1,30 +1,37 @@
-/*
- * Jalview - A Sequence Alignment Editor and Viewer
- * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
- *
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
- */
-package jalview.structure;
-
-import jalview.datamodel.*;
-
-public interface SequenceListener
-{
-  public void mouseOverSequence(SequenceI sequence, int index);
-
-  public void highlightSequence(jalview.datamodel.SearchResults results);
-
-  public void updateColours(SequenceI sequence, int index);
-}
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+package jalview.structure;
+
+import jalview.datamodel.SequenceI;
+
+public interface SequenceListener
+{
+  // TODO remove this? never called on SequenceListener type
+  public void mouseOverSequence(SequenceI sequence, int index, int pos);
+
+  public void highlightSequence(jalview.datamodel.SearchResults results);
+
+  // TODO remove this? never called
+  public void updateColours(SequenceI sequence, int index);
+
+  public VamsasSource getVamsasSource();
+
+}