X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fstructure%2FSequenceListener.java;h=81ff739197d712c906611a3d792b571afc57bce9;hb=daf64249356f9a156423bd56ab0336d9da2e5325;hp=5370e123e42d0f38489e24c412f913ea4d98aeff;hpb=40ecea964afaaf404465d75873ec915b901117a3;p=jalview.git diff --git a/src/jalview/structure/SequenceListener.java b/src/jalview/structure/SequenceListener.java index 5370e12..81ff739 100644 --- a/src/jalview/structure/SequenceListener.java +++ b/src/jalview/structure/SequenceListener.java @@ -1,30 +1,38 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer - * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation; either version 2 + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 * of the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * * You should have received a copy of the GNU General Public License - * along with this program; if not, write to the Free Software - * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.structure; -import jalview.datamodel.*; +import jalview.datamodel.SearchResultsI; +import jalview.datamodel.SequenceI; public interface SequenceListener { + // TODO remove this? never called on SequenceListener type public void mouseOverSequence(SequenceI sequence, int index, int pos); - public void highlightSequence(jalview.datamodel.SearchResults results); + public void highlightSequence(SearchResultsI results); + // TODO remove this? never called public void updateColours(SequenceI sequence, int index); + + public VamsasSource getVamsasSource(); + }