X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fviewmodel%2Fseqfeatures%2FFeaturesDisplayed.java;h=4c7e3c4d9474ab6594a25da6b4e596109ef9eca3;hb=65d6d09cd08743d481d39521bb0298ea683888f8;hp=fccdee3c02015193c071d120a02eced8be6cfb81;hpb=552a68778a21f29fe5a05fd6840f7f3864e544b1;p=jalview.git
diff --git a/src/jalview/viewmodel/seqfeatures/FeaturesDisplayed.java b/src/jalview/viewmodel/seqfeatures/FeaturesDisplayed.java
index fccdee3..4c7e3c4 100644
--- a/src/jalview/viewmodel/seqfeatures/FeaturesDisplayed.java
+++ b/src/jalview/viewmodel/seqfeatures/FeaturesDisplayed.java
@@ -1,13 +1,30 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.viewmodel.seqfeatures;
import jalview.api.FeaturesDisplayedI;
import java.util.Collection;
import java.util.HashSet;
-import java.util.Hashtable;
import java.util.Iterator;
-import java.util.List;
-import java.util.Set;
public class FeaturesDisplayed implements FeaturesDisplayedI
{
@@ -45,7 +62,7 @@ public class FeaturesDisplayed implements FeaturesDisplayedI
}
@Override
- public boolean areVisible(Collection featureTypes)
+ public boolean areVisible(Collection featureTypes)
{
return featuresDisplayed.containsAll(featureTypes);
}
@@ -58,9 +75,10 @@ public class FeaturesDisplayed implements FeaturesDisplayedI
}
@Override
- public void setAllVisible(Collection makeVisible)
+ public void setAllVisible(Collection makeVisible)
{
featuresDisplayed.addAll(makeVisible);
+ featuresRegistered.addAll(makeVisible);
}
@Override
@@ -73,6 +91,7 @@ public class FeaturesDisplayed implements FeaturesDisplayedI
public void setVisible(String featureType)
{
featuresDisplayed.add(featureType);
+ featuresRegistered.add(featureType);
}
@Override
@@ -88,7 +107,7 @@ public class FeaturesDisplayed implements FeaturesDisplayedI
}
@Override
- public int getRegisterdFeaturesCount()
+ public int getRegisteredFeaturesCount()
{
return featuresRegistered.size();
}