X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fworkers%2FAlignCalcWorker.java;h=16fc467e0bfdc1c0813497894f7ff8d2c712f7cc;hb=747167089ecf8d6afc70d417f5a20352e029bd95;hp=0ad8726e34bdac33c7f5216f4c761ad4e0c17748;hpb=37de9310bec3501cbc6381e0c3dcb282fcaad812;p=jalview.git

diff --git a/src/jalview/workers/AlignCalcWorker.java b/src/jalview/workers/AlignCalcWorker.java
index 0ad8726..16fc467 100644
--- a/src/jalview/workers/AlignCalcWorker.java
+++ b/src/jalview/workers/AlignCalcWorker.java
@@ -20,7 +20,7 @@
  */
 package jalview.workers;
 
-import jalview.api.AlignCalcManagerI;
+import jalview.api.AlignCalcManagerI2;
 import jalview.api.AlignCalcWorkerI;
 import jalview.api.AlignViewportI;
 import jalview.api.AlignmentViewPanel;
@@ -43,7 +43,7 @@ public abstract class AlignCalcWorker implements AlignCalcWorkerI
    */
   protected AlignViewportI alignViewport;
 
-  protected AlignCalcManagerI calcMan;
+  protected AlignCalcManagerI2 calcMan;
 
   protected AlignmentViewPanel ap;
 
@@ -61,7 +61,8 @@ public abstract class AlignCalcWorker implements AlignCalcWorkerI
   {
     if (calcMan != null)
     {
-      calcMan.workerComplete(this);
+      calcMan.cancelWorker(this);
+      calcMan.removeWorker(this);
     }
     alignViewport = null;
     calcMan = null;
@@ -136,4 +137,8 @@ public abstract class AlignCalcWorker implements AlignCalcWorkerI
     }
   }
 
+  public AlignViewportI getAlignViewport()
+  {
+    return alignViewport;
+  }
 }