X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fws%2Fjws2%2FParameterUtils.java;h=e2bfbbd6682e7b923edd7df44dd980e92b376d95;hb=8d0d8f010041eb2089bfe0bf7e5ad481ceae56d5;hp=80d71b5a5117bbe6b243dc20fed0c3bb63e703d3;hpb=59d682209891099d46b960509907c79e3fb276fe;p=jalview.git diff --git a/src/jalview/ws/jws2/ParameterUtils.java b/src/jalview/ws/jws2/ParameterUtils.java index 80d71b5..e2bfbbd 100644 --- a/src/jalview/ws/jws2/ParameterUtils.java +++ b/src/jalview/ws/jws2/ParameterUtils.java @@ -1,25 +1,26 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8) - * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) + * Copyright (C) 2014 The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.ws.jws2; -import java.io.BufferedReader; -import java.io.IOException; -import java.io.Reader; +import java.net.MalformedURLException; import java.util.ArrayList; import java.util.HashSet; import java.util.List; @@ -129,6 +130,7 @@ public class ParameterUtils { copy.setName(option.getName()); copy.setDescription(option.getDescription()); + copy.setBasicURL(option.getBasicURL()); copy.setFurtherDetails(option.getFurtherDetails()); copy.setRequired(option.isRequired()); List names = option.getOptionNames();