X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fws%2Frest%2FRestJob.java;h=824af901af17aaa2d6fe8ef488fe4d14f21bb41b;hb=feeb56fc2f3d7c40a46466ff52c7663cc96d6c70;hp=c4afd0c486d0547f286f0a33f855bb5aef1f1603;hpb=7ab5d6b0ba5fec1ea4a4239e79c476d841622485;p=jalview.git

diff --git a/src/jalview/ws/rest/RestJob.java b/src/jalview/ws/rest/RestJob.java
index c4afd0c..824af90 100644
--- a/src/jalview/ws/rest/RestJob.java
+++ b/src/jalview/ws/rest/RestJob.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -20,13 +20,6 @@
  */
 package jalview.ws.rest;
 
-import java.util.ArrayList;
-import java.util.Collection;
-import java.util.Hashtable;
-import java.util.Map;
-import java.util.Set;
-import java.util.Vector;
-
 import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.AlignmentI;
 import jalview.datamodel.AlignmentOrder;
@@ -37,6 +30,13 @@ import jalview.ws.AWsJob;
 import jalview.ws.rest.params.Alignment;
 import jalview.ws.rest.params.SeqGroupIndexVector;
 
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.Hashtable;
+import java.util.Map;
+import java.util.Set;
+import java.util.Vector;
+
 public class RestJob extends AWsJob
 {
 
@@ -77,8 +77,8 @@ public class RestJob extends AWsJob
    * @param viscontigs
    *          visible contigs of an alignment view from which _input was derived
    */
-  public RestJob(int jobNum, RestJobThread restJobThread,
-          AlignmentI _input, int[] viscontigs)
+  public RestJob(int jobNum, RestJobThread restJobThread, AlignmentI _input,
+          int[] viscontigs)
   {
     rsd = restJobThread.restClient.service;
     jobnum = jobNum;
@@ -90,8 +90,8 @@ public class RestJob extends AWsJob
     // get sequences for the alignmentI
     // get groups trimmed to alignment columns
     // get any annotation trimmed to start/end columns, too.
-    squniq = jalview.analysis.SeqsetUtils.uniquify(
-            _input.getSequencesArray(), true);
+    squniq = jalview.analysis.SeqsetUtils
+            .uniquify(_input.getSequencesArray(), true);
     // prepare input
     // form alignment+groups+annotation,preprocess and then record references
     // for formatters
@@ -122,8 +122,8 @@ public class RestJob extends AWsJob
           }
           else
           {
-            statMessage = ("Not enough groups defined on the alignment - need at least " + prm
-                    .getValue().min);
+            statMessage = ("Not enough groups defined on the alignment - need at least "
+                    + prm.getValue().min);
           }
         }
       }