X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fjalview%2Fws%2Frest%2Fparams%2FSeqGroupIndexVector.java;h=dcb7fab8876a2fb694eaa703d10358a04241c22f;hb=5a3e8375831cd87fb3668e0945f907ddce0ab82a;hp=30dc47353b473ce4723cf549c007a7e46a257cb7;hpb=7ab5d6b0ba5fec1ea4a4239e79c476d841622485;p=jalview.git

diff --git a/src/jalview/ws/rest/params/SeqGroupIndexVector.java b/src/jalview/ws/rest/params/SeqGroupIndexVector.java
index 30dc473..dcb7fab 100644
--- a/src/jalview/ws/rest/params/SeqGroupIndexVector.java
+++ b/src/jalview/ws/rest/params/SeqGroupIndexVector.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -23,6 +23,7 @@ package jalview.ws.rest.params;
 import jalview.datamodel.AlignmentI;
 import jalview.datamodel.SequenceGroup;
 import jalview.datamodel.SequenceI;
+import jalview.util.MessageManager;
 import jalview.ws.params.OptionI;
 import jalview.ws.params.simple.IntegerParameter;
 import jalview.ws.params.simple.Option;
@@ -47,13 +48,12 @@ import org.apache.http.entity.mime.content.StringBody;
  * @author JimP
  * 
  */
-public class SeqGroupIndexVector extends InputType implements
-        AlignmentProcessor
+public class SeqGroupIndexVector extends InputType
+        implements AlignmentProcessor
 {
   public SeqGroupIndexVector()
   {
-    super(new Class[]
-    { AlignmentI.class });
+    super(new Class[] { AlignmentI.class });
   }
 
   /**
@@ -99,8 +99,10 @@ public class SeqGroupIndexVector extends InputType implements
       {
         if (sg.getSize() < minsize)
         {
-          throw new NoValidInputDataException("Group contains less than "
-                  + minsize + " sequences.");
+          throw new NoValidInputDataException(MessageManager.formatMessage(
+                  "exception.notvaliddata_group_contains_less_than_min_seqs",
+                  new String[]
+                  { Integer.valueOf(minsize).toString() }));
         }
         // TODO: refactor to sequenceGroup for efficiency -
         // getAlignmentRowInterval(AlignmentI al)
@@ -118,8 +120,7 @@ public class SeqGroupIndexVector extends InputType implements
           }
           if (se == null)
           {
-            se = new int[]
-            { p, p };
+            se = new int[] { p, p };
           }
           else
           {
@@ -141,19 +142,16 @@ public class SeqGroupIndexVector extends InputType implements
     {
       if (lowest - 1 > minsize)
       {
-        gl.add(0, new int[]
-        { 0, lowest - 2 });
+        gl.add(0, new int[] { 0, lowest - 2 });
       }
       if ((al.getHeight() - 1 - highest) > minsize)
       {
-        gl.add(new int[]
-        { highest + 1, al.getHeight() - 1 });
+        gl.add(new int[] { highest + 1, al.getHeight() - 1 });
       }
     }
     else
     {
-      gl.add(new int[]
-      { 0, al.getHeight() - 1 });
+      gl.add(new int[] { 0, al.getHeight() - 1 });
     }
     if (min >= 0 && gl.size() < min)
     {
@@ -261,8 +259,8 @@ public class SeqGroupIndexVector extends InputType implements
         return true;
       } catch (Exception x)
       {
-        warnings.append("Invalid molecule type '" + val
-                + "'. Must be one of (");
+        warnings.append(
+                "Invalid molecule type '" + val + "'. Must be one of (");
         for (molType v : molType.values())
         {
           warnings.append(" " + v);