X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=src%2Fuk%2Fac%2Fvamsas%2Fobjects%2FIDocumentUpdater.java;h=c8ffc09354bf191e85dd405830d227deb6444226;hb=844ccad5a3fcbedec17b2af66d460f31abc7cff1;hp=bb8e2ae1103a771237159976ac02b2e1416724fd;hpb=6f33f705957d674dc2ab6c994a6ea87f7a91f40f;p=vamsas.git diff --git a/src/uk/ac/vamsas/objects/IDocumentUpdater.java b/src/uk/ac/vamsas/objects/IDocumentUpdater.java index bb8e2ae..c8ffc09 100644 --- a/src/uk/ac/vamsas/objects/IDocumentUpdater.java +++ b/src/uk/ac/vamsas/objects/IDocumentUpdater.java @@ -1,76 +1,96 @@ +/* + * This file is part of the Vamsas Client version 0.1. + * Copyright 2009 by Jim Procter, Iain Milne, Pierre Marguerite, + * Andrew Waterhouse and Dominik Lindner. + * + * Earlier versions have also been incorporated into Jalview version 2.4 + * since 2008, and TOPALi version 2 since 2007. + * + * The Vamsas Client is free software: you can redistribute it and/or modify + * it under the terms of the GNU Lesser General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * The Vamsas Client is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU Lesser General Public License for more details. + * + * You should have received a copy of the GNU Lesser General Public License + * along with the Vamsas Client. If not, see . + */ package uk.ac.vamsas.objects; import uk.ac.vamsas.objects.core.*; -public interface IDocumentUpdater -{ - public void update(Alignment vobj); - - public void update(AlignmentAnnotation vobj); - - public void update(AlignmentSequence vobj); - - public void update(AlignmentSequenceAnnotation vobj); - - public void update(AnnotationElement vobj); - - public void update(AppData vobj); - - public void update(ApplicationData vobj); - - public void update(Common vobj); - - public void update(DataSet vobj); - - public void update(DataSetAnnotations vobj); - - public void update(DbRef vobj); - - public void update(Entry vobj); - - public void update(Glyph vobj); - - public void update(Input vobj); - - public void update(Instance vobj); - - public void update(Link vobj); - - public void update(LockFile vobj); - - public void update(Map vobj); - +public interface IDocumentUpdater { + public void update(Alignment vobj); + + public void update(AlignmentAnnotation vobj); + + public void update(AlignmentSequence vobj); + + public void update(AlignmentSequenceAnnotation vobj); + + public void update(AnnotationElement vobj); + + public void update(AppData vobj); + + public void update(ApplicationData vobj); + + public void update(Common vobj); + + public void update(DataSet vobj); + + public void update(DataSetAnnotations vobj); + + public void update(DbRef vobj); + + public void update(Entry vobj); + + public void update(Glyph vobj); + + public void update(Input vobj); + + public void update(Instance vobj); + + public void update(Link vobj); + + public void update(LockFile vobj); + + public void update(Map vobj); + // TODO: replace with mapRangeType handler public void update(MapList vobj) {} - - public void update(SequenceMapping vobj); - - public void update(Newick vobj); - - public void update(Param vobj); - - public void update(Pos vobj); - - public void update(Property vobj); - - public void update(Provenance vobj); - - public void update(RangeAnnotation vobj); - - public void update(RangeType vobj); - - public void update(Score vobj); - - public void update(Seg vobj); - - public void update(Sequence vobj); - - public void update(SequenceType vobj); - - public void update(Tree vobj); - - public void update(User vobj); - - public void update(VAMSAS vobj); - - public void update(VamsasDocument vobj); -} \ No newline at end of file + + public void update(SequenceMapping vobj); + + public void update(Newick vobj); + + public void update(Param vobj); + + public void update(Pos vobj); + + public void update(Property vobj); + + public void update(Provenance vobj); + + public void update(RangeAnnotation vobj); + + public void update(RangeType vobj); + + public void update(Score vobj); + + public void update(Seg vobj); + + public void update(Sequence vobj); + + public void update(SequenceType vobj); + + public void update(Tree vobj); + + public void update(User vobj); + + public void update(VAMSAS vobj); + + public void update(VamsasDocument vobj); +}