X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=test%2Fjalview%2Fdatamodel%2FSequenceFeatureTest.java;h=673ea290a7e74ca7c1de3e7d04fc56e528060624;hb=5a631296dd1dcc1df7b50487a647c27333696c74;hp=cd8f9eb5bc415837a026e5514fcb02e7910d9a55;hpb=e9a1285c3e0df3505d85121d84c2d33d899820f2;p=jalview.git

diff --git a/test/jalview/datamodel/SequenceFeatureTest.java b/test/jalview/datamodel/SequenceFeatureTest.java
index cd8f9eb..673ea29 100644
--- a/test/jalview/datamodel/SequenceFeatureTest.java
+++ b/test/jalview/datamodel/SequenceFeatureTest.java
@@ -26,11 +26,11 @@ import static org.testng.AssertJUnit.assertNull;
 import static org.testng.AssertJUnit.assertSame;
 import static org.testng.AssertJUnit.assertTrue;
 
-import jalview.gui.JvOptionPane;
-
 import org.testng.annotations.BeforeClass;
 import org.testng.annotations.Test;
 
+import jalview.gui.JvOptionPane;
+
 public class SequenceFeatureTest
 {
 
@@ -285,7 +285,7 @@ public class SequenceFeatureTest
     String expected = "<br><table><tr><td>Location</td><td>TestSeq</td><td>22</td></tr>"
             + "<tr><td>Type</td><td>variant</td><td></td></tr>"
             + "<tr><td>Description</td><td>G,C</td><td></td></tr></table>";
-    assertEquals(expected, sf.getDetailsReport(seqName));
+    assertEquals(expected, sf.getDetailsReport(seqName, null));
 
     // contact feature
     sf = new SequenceFeature("Disulphide Bond", "a description", 28, 31,
@@ -293,7 +293,7 @@ public class SequenceFeatureTest
     expected = "<br><table><tr><td>Location</td><td>TestSeq</td><td>28:31</td></tr>"
             + "<tr><td>Type</td><td>Disulphide Bond</td><td></td></tr>"
             + "<tr><td>Description</td><td>a description</td><td></td></tr></table>";
-    assertEquals(expected, sf.getDetailsReport(seqName));
+    assertEquals(expected, sf.getDetailsReport(seqName, null));
 
     sf = new SequenceFeature("variant", "G,C", 22, 33,
             12.5f, "group");
@@ -306,7 +306,7 @@ public class SequenceFeatureTest
             + "<tr><td>Group</td><td>group</td><td></td></tr>"
             + "<tr><td>Child</td><td></td><td>ENSP002</td></tr>"
             + "<tr><td>Parent</td><td></td><td>ENSG001</td></tr></table>";
-    assertEquals(expected, sf.getDetailsReport(seqName));
+    assertEquals(expected, sf.getDetailsReport(seqName, null));
 
     /*
      * feature with embedded html link in description
@@ -317,6 +317,6 @@ public class SequenceFeatureTest
             + "<tr><td>Type</td><td>Pfam</td><td></td></tr>"
             + "<tr><td>Description</td><td>Fer2 Status: True Positive <a href=\"http://pfam.xfam.org/family/PF00111\">Pfam 8_8</a></td><td></td></tr>"
             + "<tr><td>Group</td><td>Uniprot</td><td></td></tr></table>";
-    assertEquals(expected, sf.getDetailsReport(seqName));
+    assertEquals(expected, sf.getDetailsReport(seqName, null));
   }
 }