X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=test%2Fjalview%2Ffts%2Fservice%2Fpdb%2FPDBFTSRestClientTest.java;h=cde7d155efcd4d345154542e2ff4dc46db1866ab;hb=db93a1adcbe0a4eaaf06e0a70ade0d6c5c1961c3;hp=ed248bbade0ee2fa5c6dfcc317da407264d4ceb6;hpb=cbc07eab0291f023f89b2554c488ae9e4587ae2a;p=jalview.git diff --git a/test/jalview/fts/service/pdb/PDBFTSRestClientTest.java b/test/jalview/fts/service/pdb/PDBFTSRestClientTest.java index ed248bb..cde7d15 100644 --- a/test/jalview/fts/service/pdb/PDBFTSRestClientTest.java +++ b/test/jalview/fts/service/pdb/PDBFTSRestClientTest.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) - * Copyright (C) $$Year-Rel$$ The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2) + * Copyright (C) 2015 The Jalview Authors * * This file is part of Jalview. * @@ -72,13 +72,11 @@ public class PDBFTSRestClientTest { wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("molecule_type")); - wantedFields -.add(PDBFTSRestClient.getInstance() + wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("pdb_id")); wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("genus")); - wantedFields -.add(PDBFTSRestClient.getInstance() + wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("gene_name")); wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("title")); @@ -117,13 +115,11 @@ public class PDBFTSRestClientTest { wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("molecule_type")); - wantedFields -.add(PDBFTSRestClient.getInstance() + wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("pdb_id")); wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("genus")); - wantedFields -.add(PDBFTSRestClient.getInstance() + wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("gene_name")); wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("title")); @@ -147,13 +143,11 @@ public class PDBFTSRestClientTest { wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("molecule_type")); - wantedFields -.add(PDBFTSRestClient.getInstance() + wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("pdb_id")); wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("genus")); - wantedFields -.add(PDBFTSRestClient.getInstance() + wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("gene_name")); wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("title")); @@ -190,9 +184,7 @@ public class PDBFTSRestClientTest assertEquals(expectedErrorMsg, parsedErrorResponse); } - @Test( - groups = { "External" }, - expectedExceptions = Exception.class) + @Test(groups = { "External" }, expectedExceptions = Exception.class) public void testForExpectedRuntimeException() throws Exception { List wantedFields = new ArrayList(); @@ -206,7 +198,7 @@ public class PDBFTSRestClientTest PDBFTSRestClient.getInstance().executeRequest(request); } - // JBP: Is this actually external ? Looks like it is mocked + // JBP: Is this actually external ? Looks like it is mocked @Test(groups = { "External" }) public void parsePDBJsonResponseTest() { @@ -215,13 +207,11 @@ public class PDBFTSRestClientTest { wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("molecule_type")); - wantedFields -.add(PDBFTSRestClient.getInstance() + wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("pdb_id")); wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("genus")); - wantedFields -.add(PDBFTSRestClient.getInstance() + wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("gene_name")); wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("title")); @@ -259,13 +249,11 @@ public class PDBFTSRestClientTest .getDataColumnByNameOrCode("molecule_type")); wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("genus")); - wantedFields -.add(PDBFTSRestClient.getInstance() + wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("gene_name")); wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("title")); - wantedFields -.add(PDBFTSRestClient.getInstance() + wantedFields.add(PDBFTSRestClient.getInstance() .getDataColumnByNameOrCode("pdb_id")); } catch (Exception e) { @@ -273,11 +261,9 @@ public class PDBFTSRestClientTest } try { - assertEquals(5, - PDBFTSRestClient.getInstance() + assertEquals(5, PDBFTSRestClient.getInstance() .getPrimaryKeyColumIndex(wantedFields, true)); - assertEquals(4, - PDBFTSRestClient.getInstance() + assertEquals(4, PDBFTSRestClient.getInstance() .getPrimaryKeyColumIndex(wantedFields, false)); } catch (Exception e) {