X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=test%2Fjalview%2Fio%2FPfamFormatInputTest.java;h=5dd4ecb6d0aab6ec8bfaf57d8fc2de65c450ba3a;hb=08c202dd3ef0f34bde305c11da9eec03520174dc;hp=46e5af71e860c80ce11e95c44976510ae64f043b;hpb=ab24e67378e61c3ba70fd3bc557259112a87b3ca;p=jalview.git diff --git a/test/jalview/io/PfamFormatInputTest.java b/test/jalview/io/PfamFormatInputTest.java index 46e5af7..5dd4ecb 100644 --- a/test/jalview/io/PfamFormatInputTest.java +++ b/test/jalview/io/PfamFormatInputTest.java @@ -12,8 +12,8 @@ public class PfamFormatInputTest @Test public void testPfamFormatNoLimits() throws IOException { - AlignmentI al = new jalview.io.AppletFormatAdapter().readFile( - "ASEQ\t...--FFAFAFF--", AppletFormatAdapter.PASTE, "PFAM"); + AlignmentI al = new jalview.io.AppletFormatAdapter().readFile("ASEQ" + + '\t' + "...--FFAFAFF--", AppletFormatAdapter.PASTE, "PFAM"); Assert.assertEquals(1, al.getHeight(), "Wrong number of sequences"); Assert.assertTrue(al.hasValidSequence(), "Didn't extract limits from PFAM ID"); @@ -22,9 +22,9 @@ public class PfamFormatInputTest @Test public void testPfamFormatValidLimits() throws IOException { - AlignmentI al = new jalview.io.AppletFormatAdapter() - .readFile("ASEQ/15-25\t...--FFAFAFF--", - AppletFormatAdapter.PASTE, "PFAM"); + AlignmentI al = new jalview.io.AppletFormatAdapter().readFile( + "ASEQ/15-25" + '\t' + "...--FFAFAFF--", + AppletFormatAdapter.PASTE, "PFAM"); Assert.assertEquals(1, al.getHeight(), "Wrong number of sequences"); Assert.assertTrue(al.hasValidSequence(), "Didn't extract limits from PFAM ID");