X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=test%2Fjalview%2Futil%2FDBRefUtilsTest.java;h=d3e6221d22b0ef8b4d6d15bcbd13cebca3e8e438;hb=3da878124135ff033f42d19d8733891b09e953cd;hp=963ca7c807f7296e1baca5fc685b4e094da64f7f;hpb=2d8dfad8a0aa6a6febfc0c3bc0379de0b46e0cfc;p=jalview.git diff --git a/test/jalview/util/DBRefUtilsTest.java b/test/jalview/util/DBRefUtilsTest.java index 963ca7c..d3e6221 100644 --- a/test/jalview/util/DBRefUtilsTest.java +++ b/test/jalview/util/DBRefUtilsTest.java @@ -21,7 +21,6 @@ package jalview.util; import static org.testng.AssertJUnit.assertEquals; -import static org.testng.AssertJUnit.assertFalse; import static org.testng.AssertJUnit.assertNull; import static org.testng.AssertJUnit.assertSame; import static org.testng.AssertJUnit.assertTrue; @@ -122,38 +121,6 @@ public class DBRefUtilsTest assertEquals("pfam", DBRefUtils.getCanonicalName("pfam")); } - - @Test(groups = { "Functional" }) - public void testIsDasCoordinateSystem() - { - assertFalse(DBRefUtils.isDasCoordinateSystem(null, null)); - assertFalse(DBRefUtils.isDasCoordinateSystem("pdbresnum", null)); - assertFalse(DBRefUtils.isDasCoordinateSystem(null, new DBRefEntry( - "PDB", "v1", "a1"))); - - assertTrue(DBRefUtils.isDasCoordinateSystem("pdbresnum", - new DBRefEntry("PDB", "v1", "a1"))); - assertTrue(DBRefUtils.isDasCoordinateSystem("PDBRESNUM", - new DBRefEntry("PDB", "v1", "a1"))); - // "pdb" is converted to upper-case in DBRefEntry constructor - assertTrue(DBRefUtils.isDasCoordinateSystem("pdbresnum", - new DBRefEntry("pdb", "v1", "a1"))); - assertFalse(DBRefUtils.isDasCoordinateSystem("pdb", new DBRefEntry( - "pdb", "v1", "a1"))); - - assertTrue(DBRefUtils.isDasCoordinateSystem("UNIPROT", new DBRefEntry( - "Uniprot", "v1", "a1"))); - assertTrue(DBRefUtils.isDasCoordinateSystem("Uniprot", new DBRefEntry( - "UNIPROT", "v1", "a1"))); - assertFalse(DBRefUtils.isDasCoordinateSystem("UNIPROTKB", - new DBRefEntry("pdb", "v1", "a1"))); - - assertTrue(DBRefUtils.isDasCoordinateSystem("EMBL", new DBRefEntry( - "EMBL", "v1", "a1"))); - assertTrue(DBRefUtils.isDasCoordinateSystem("embl", new DBRefEntry( - "embl", "v1", "a1"))); - } - /** * Test 'parsing' a DBRef - non PDB case */