X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=utils%2Fcheckstyle%2Fimport-control.xml;h=478966ffd49c170ef3995f912802df572c000a47;hb=29701f0d4bd7f80989b0a3095d44d2dd8e1644bd;hp=c47aaec1480806cb54ba1ff5af3e4509b4b289f0;hpb=a57976ba40e1abe6d7c1940386e1a25419ef9c9d;p=jalview.git

diff --git a/utils/checkstyle/import-control.xml b/utils/checkstyle/import-control.xml
index c47aaec..478966f 100644
--- a/utils/checkstyle/import-control.xml
+++ b/utils/checkstyle/import-control.xml
@@ -94,6 +94,7 @@
 	    	<allow pkg="compbio.metadata" class="jalview.gui.WsJobParameters"/>
 	    	<allow pkg="fr.orsay.lri.varna" class="jalview.gui.AppVarna"/>
 	    	<allow pkg="fr.orsay.lri.varna" class="jalview.gui.AppVarnaBinding"/>
+	    	<allow pkg="org.stackoverflowusers.file" class="jalview.gui.Desktop"/>
 	    	<allow pkg="uk.ac.vamsas" class="jalview.gui.VamsasApplication"/>
 	    </subpackage>
    		
@@ -116,6 +117,9 @@
 	    	<allow pkg="uk.ac.vamsas"/>
 	    	<allow pkg="fr.orsay.lri.varna"/>
 	    	<allow pkg="MCview"/>
+			<subpackage name="vcf">
+		    	<allow pkg="htsjdk\.*" regex="true"/>
+			</subpackage>	    
 		</subpackage>	    
 		   		
 		<subpackage name="javascript">