X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=sidebyside;f=website%2Findex.html;h=c2ae8883c163cd6cd5bd29d917d263370b85f84a;hb=c46caed03164e4396eb55dc30e7db3558a7b06cc;hp=ee351399520d8da14570eeb9659c90d568cfa6a2;hpb=3b3bb69237d2287235c08efaa9e8627c88d21815;p=jabaws.git diff --git a/website/index.html b/website/index.html index ee35139..c2ae888 100644 --- a/website/index.html +++ b/website/index.html @@ -4,7 +4,7 @@ - + Java Bioinformatics Analyses Web Services (JABAWS) main page @@ -19,7 +19,7 @@ - +
JABAWS-2.0.1JABAWS-2.5.0 Disorder
@@ -35,11 +35,13 @@ Usage Statistics Services Status Contact Us - Barton Group + Barton Group + Funding +
-

JABAWS 2.0.1

+

JABAWS 2.5

JABAWS is free software which provides web services conveniently packaged to run on your local computer, server, cluster or Amazon EC2 instance. Services for multiple sequence alignment include Clustal Omega, Clustal W, @@ -50,7 +52,7 @@ prediction of protein disorder with DisEMBL, < and calculation of amino acid alignment conservation with AACon.

-JABA 2.0.1 Web Services installations can be accessed from the Jalview desktop application (version 2.8 onwards) and the JABAWS command-line client, and provide multiple alignment +JABA 2.5 Web Services installations can be accessed from the Jalview desktop application (version 2.8 onwards) and the JABAWS command-line client, and provide multiple alignment and sequence analysis calculations limited only by your own computing resources.

@@ -59,7 +61,7 @@ and sequence analysis calculations limited only by your own computing resources.

For Users

- The Server: JABAWS Virtual Appliance: (440M) + The Server: JABAWS Virtual Appliance: (440M) or JABAWS on Amazon Webservices Cloud
The Main Client: Jalview (18M)

To use JABA Web Services on most operating systems, just download and install @@ -85,8 +87,8 @@ and sequence analysis calculations limited only by your own computing resources. The Server: JABAWS Web Application aRchive (55M)
The Client: - Command Line Client binary | source + Command Line Client binary | source

You can either use the JABAWS Virtual Appliance or the JABAWS Web Application aRchive (WAR) from your own computer or a lab server. @@ -101,8 +103,8 @@ Check out the quick start guide for furt

Public JABAWS Server

-

You can access our public JABA Web Services with our command line client, - Jalview, or with your own program. Jalview version 2.8 or later is fully compatible with JABAWS 2.0.1. +

You can access our public JABA Web Services with our command line client, + Jalview, or with your own program. Jalview version 2.8 or later is fully compatible with JABAWS 2.5. The latest versions of Jalview are configured to use public JABAWS server by default.

  • The JABAWS public web services address is http://www.compbio.dundee.ac.uk/jabaws
    • @@ -114,13 +116,11 @@ title="http://www.compbio.dundee.ac.uk/jabaws/ClustalWS?" rel= or if you are concerned about privacy or on an unreliable network connection, then you can download and run the JABAWS Server on your own hardware.

    Previous versions of JABAWS

    -

    Old JABAWS versions are available here: - http://www.compbio.dundee.ac.uk/jabaws1 and - http://www.compbio.dundee.ac.uk/jabaws2. - We advise you to update to the JABAWS 2.0.1 as this version is fully backward compatible with JABAWS v1.0 and v2.0 and - contain numerous improvements. Please consult the manual for more information - on compatibility between versions. -

    +

    We advise you to update to JABAWS 2.5 as this version is fully backward compatible with JABAWS v1.0 and v2.0 and + contains some important bug fixes. Please consult the manual for more information + on compatibility between versions.

    Should you require them, however, old versions of JABAWS are available here:

    Reference

    Peter V. Troshin, James B. Procter and Geoffrey J. Barton - "Java Bioinformatics Analysis Web Services for