X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=.classpath;h=7f1a8c133dc5c4aa1016c1391cdb5a446e2ab000;hb=c0d7fb852ebfdb0b4322c636dd379a031de665c8;hp=9164f3d7ee6482d6791173ac5c65e696d586baa4;hpb=c75ca41e87495a7d86ebc3c8cbeb56610ac48758;p=jalview.git

diff --git a/.classpath b/.classpath
index 9164f3d..7f1a8c1 100644
--- a/.classpath
+++ b/.classpath
@@ -39,8 +39,7 @@
 	<classpathentry kind="lib" path="lib/jdas-1.0.4.jar"/>
 	<classpathentry kind="lib" path="lib/spring-core-3.0.5.RELEASE.jar"/>
 	<classpathentry kind="lib" path="lib/spring-web-3.0.5.RELEASE.jar"/>
-	<classpathentry kind="lib" path="lib/groovy-all-1.8.2.jar"/>
-	<classpathentry kind="lib" path="lib/min-jabaws-client-2.1.0.jar" sourcepath="/clustengine"/>
+	<classpathentry kind="lib" path="lib/jabaws-min-client-2.2.0.jar" sourcepath="/clustengine"/>
 	<classpathentry kind="lib" path="lib/json_simple-1.1.jar" sourcepath="/Users/jimp/Downloads/json_simple-1.1-all.zip"/>
 	<classpathentry kind="lib" path="lib/slf4j-api-1.7.7.jar"/>
 	<classpathentry kind="lib" path="lib/jsoup-1.8.1.jar"/>
@@ -49,7 +48,7 @@
 	<classpathentry kind="lib" path="lib/VARNAv3-93.jar"/>
 	<classpathentry kind="lib" path="lib/jfreesvg-2.1.jar"/>
 	<classpathentry kind="lib" path="lib/quaqua-filechooser-only-8.0.jar"/>
-	<classpathentry kind="lib" path="lib/htsjdk-1.133.jar"/>
+	<classpathentry kind="lib" path="lib/htsjdk-2.12.0.jar"/>
 	<classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/plugin"/>
 	<classpathentry kind="lib" path="lib/xml-apis.jar"/>
 	<classpathentry kind="con" path="org.eclipse.jdt.junit.JUNIT_CONTAINER/4"/>
@@ -65,7 +64,10 @@
 	<classpathentry kind="lib" path="lib/jetty-http-9.2.10.v20150310.jar"/>
 	<classpathentry kind="lib" path="lib/jetty-io-9.2.10.v20150310.jar"/>
 	<classpathentry kind="lib" path="lib/java-json.jar"/>
-	<classpathentry kind="lib" path="lib/Jmol-14.2.14_2015.06.11.jar"/>
+	<classpathentry kind="lib" path="lib/Jmol-14.6.4_2016.10.26.jar"/>
 	<classpathentry kind="con" path="org.testng.TESTNG_CONTAINER"/>
+	<classpathentry kind="lib" path="lib/biojava-core-4.1.0.jar"/>
+	<classpathentry kind="lib" path="lib/biojava-ontology-4.1.0.jar"/>
+	<classpathentry kind="lib" path="lib/groovy-all-2.4.12-indy.jar"/>
 	<classpathentry kind="output" path="classes"/>
 </classpath>