X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=FEATURETODO;h=83f3bbf7011f70725311815563638cfd28a5b8b9;hb=338fec5009a92d5cedc15612a13313bdb3f42756;hp=5a5c5c1717ec01b7b38bc55d21a8e417980ce4d6;hpb=bbfdb203ce3a889600caa52478478b75ab03809f;p=jalview.git

diff --git a/FEATURETODO b/FEATURETODO
index 5a5c5c1..83f3bbf 100644
--- a/FEATURETODO
+++ b/FEATURETODO
@@ -1,8 +1,15 @@
-Normalised logo feature todo
+JAL-958 Normalised logo feature todo
 
-* transfer and update calcs in applet
+* add gui switches in applet for normalised logo display
 * add flags for normalised logo display to AnnotationFile and Jalview Project
-* add parameter for applet
 * add preference for application
 * consider rationalising flag model for N types of consensus/logo calculation methods
 
+JAL-976 JABAWS 2 services todo
+* test store/recall of settings for AACons service
+* debug IUPred for case when parameters are tweaked and get a 'sequences must be aligned' error from JABAWS server
+* decide where AACons job stats should be stored (this is a report for the current view, rather than alignment as a whole)
+* make disorder calculation more intelligent
+-* only calculate for sequences where no calculation has already been performed ?
+-* if parameters are changed, old features should be replaced with new ones
+..? calcId for features, too ?