X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=IDEAS.txt;h=bab0292f3f8e74864419908013df93242751be94;hb=2c1c5633a7d1c31008e04136cc4dae6fca1b369e;hp=f9f65fd6590beff808c893063934492fc64d475a;hpb=212bbd43c19f645cccef34a608dc001fb694833c;p=jabaws.git

diff --git a/IDEAS.txt b/IDEAS.txt
index f9f65fd..bab0292 100644
--- a/IDEAS.txt
+++ b/IDEAS.txt
@@ -1,5 +1,5 @@
 FUTURE TODO
-Registry for jalview WS - gives list of web services providers
+
 Registry for jalview WS - gives list of web services providers
  - checks the status of the web services
  - web service providers gives list of available WS
@@ -26,7 +26,17 @@ FUTURE TASKS
 Prepare HMM profile for the user alignment and call jnet - instead of jpred. 
 JPRED REWRITING Wrap Jpred
 Wrap scanPS    
-Look at SIFTS at EBI 
+
+CBS soft: 
+Transmembrane regions
+Phosphorilation sites
+Glycozilation sites
+Signal P
+
+They all have SOAP WS...
+ 
+CDD domains
+PFAM domains
  
 JPRED IMPROVEMENTS
 1) Make sure PSIBLAST does not generate large output (e.g. one approach is to stop on the first iteration