X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=THIRDPARTYLIBS;h=b44be9c599b34f876bedefa1e1da44679cb2c89f;hb=ff66ff96ff69803e61a079c2d9d066a93cf2b156;hp=7d4ffc71ca33e6f469a17c3a6c2d90838719a2df;hpb=446084b4f697fedea2053fc6486265b35906c7fe;p=jalview.git diff --git a/THIRDPARTYLIBS b/THIRDPARTYLIBS index 7d4ffc7..b44be9c 100644 --- a/THIRDPARTYLIBS +++ b/THIRDPARTYLIBS @@ -13,6 +13,14 @@ ext.edu.ucsf.rbvi.strucviz2 includes sources originally developed by Scooter Mor Licensing information for each library is given below: +FastInfoset.jar + + + + + + + JGoogleAnalytics_0.3.jar APL 2.0 License - http://code.google.com/p/jgoogleanalytics/ Jmol-14.6.4_2016.10.26.jar GPL/LGPLv2 http://sourceforge.net/projects/jmol/files/ VARNAv3-93.jar GPL licenced software by K�vin Darty, Alain Denise and Yann Ponty. http://varna.lri.fr @@ -30,7 +38,6 @@ httpclient-4.0.3.jar httpcore-4.0.1.jar httpmime-4.0.3.jar jaxrpc.jar -jdas-1.0.4.jar : Apache License - built from http://code.google.com/p/jdas/ (29th Feb 2012) jhall.jar jswingreader-0.3.jar : Apache license - built from http://jswingreader.sourceforge.net/ svn/trunk v12 log4j-1.2.8.jar @@ -39,8 +46,6 @@ miglayout-4.0-swing.jar BSD http://www.migcalendar.com/miglayout/versions/4.0/li min-jaba-client.jar regex.jar saaj.jar -spring-core-3.0.5.RELEASE.jar : Apache License: jdas runtime dependencies retrieved via maven -spring-web-3.0.5.RELEASE.jar : Apache License: jdas runtime dependencies retrieved via maven vamsas-client.jar wsdl4j.jar xercesImpl.jar @@ -52,13 +57,19 @@ quaqua: v.8.0 (latest stable) by Randel S Hofer. LGPL and BSD Modified license: vaqua5-patch: This is a patched version of VAqua v5 (latest stable) by Alan Snyder et al. GPLv3 with Classpath exception, also includes contributions from Quaqua: http://violetlib.org/vaqua/overview.html - see doc/patching-vaqua.txt for patch details, and http://issues.jalview.org/browse/JAL-2988 for details of the bug that the patch addresses. -lib/htsjdk-1.120-SNAPSHOT.jar: (currently not required for 2.10) built from maven master at https://github.com/samtools/htsjdk MIT License to Broad Institute +lib/htsjdk-2.12.jar: built from maven master at https://github.com/samtools/htsjdk MIT License to Broad Institute lib/biojava-core-4.1.0.jar LGPLv2.1 - latest license at https://github.com/biojava/biojava/blob/master/LICENSE lib/biojava-ontology-4.1.0.jar LGPLv2.1 - latest license at https://github.com/biojava/biojava/blob/master/LICENSE +Libraries for Test Suite + +utils/classgraph-4.1.6.jar: BSD License - allows recovery of classpath for programmatic construction of a Java command line to launch Jalview + version 4.1.6 downloaded from https://mvnrepository.com/artifact/io.github.classgraph/classgraph/4.1.6 + + Additional dependencies examples/javascript/deployJava.js : http://java.com/js/deployJava.js