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diff --git a/binaries/src/mafft/extensions/mxscarna_src/config.h b/binaries/src/mafft/extensions/mxscarna_src/config.h
new file mode 100644
index 0000000..51c27b8
--- /dev/null
+++ b/binaries/src/mafft/extensions/mxscarna_src/config.h
@@ -0,0 +1,86 @@
+/* config.h.  Generated by configure.  */
+/* config.h.in.  Generated from configure.in by autoheader.  */
+
+/* Define to 1 if you have the `erand48' function. */
+#define HAVE_ERAND48 1
+
+/* Define to 1 if you have the <inttypes.h> header file. */
+#define HAVE_INTTYPES_H 1
+
+/* Define to 1 if you have the <malloc.h> header file. */
+#define HAVE_MALLOC_H 1
+
+/* Define to 1 if you have the <memory.h> header file. */
+#define HAVE_MEMORY_H 1
+
+/* Define to 1 if you have the <stdint.h> header file. */
+#define HAVE_STDINT_H 1
+
+/* Define to 1 if you have the <stdlib.h> header file. */
+#define HAVE_STDLIB_H 1
+
+/* Define to 1 if you have the `strchr' function. */
+#define HAVE_STRCHR 1
+
+/* Define to 1 if you have the `strdup' function. */
+#define HAVE_STRDUP 1
+
+/* Define to 1 if you have the <strings.h> header file. */
+#define HAVE_STRINGS_H 1
+
+/* Define to 1 if you have the <string.h> header file. */
+#define HAVE_STRING_H 1
+
+/* Define to 1 if you have the `strstr' function. */
+#define HAVE_STRSTR 1
+
+/* Define to 1 if you have the <sys/stat.h> header file. */
+#define HAVE_SYS_STAT_H 1
+
+/* Define to 1 if you have the <sys/types.h> header file. */
+#define HAVE_SYS_TYPES_H 1
+
+/* Define to 1 if you have the <unistd.h> header file. */
+#define HAVE_UNISTD_H 1
+
+/* Name of package */
+#define PACKAGE "ViennaRNA"
+
+/* Define to the address where bug reports for this package should be sent. */
+#define PACKAGE_BUGREPORT "rna@tbi.univie.ac.at"
+
+/* Define to the full name of this package. */
+#define PACKAGE_NAME "ViennaRNA"
+
+/* Define to the full name and version of this package. */
+#define PACKAGE_STRING "ViennaRNA 1.6.1"
+
+/* Define to the one symbol short name of this package. */
+#define PACKAGE_TARNAME "ViennaRNA"
+
+/* Define to the version of this package. */
+#define PACKAGE_VERSION "1.6.1"
+
+/* Define to 1 if you have the ANSI C header files. */
+#define STDC_HEADERS 1
+
+/* only for gcc */
+#define UNUSED __attribute__ ((unused))
+
+/* Version number of package */
+#define VERSION "1.6.1"
+
+/* Define if using the dmalloc debugging malloc package */
+/* #undef WITH_DMALLOC */
+
+/* Define to empty if `const' does not conform to ANSI C. */
+/* #undef const */
+
+/* Define to `__inline__' or `__inline' if that's what the C compiler
+   calls it, or to nothing if 'inline' is not supported under any name.  */
+#ifndef __cplusplus
+/* #undef inline */
+#endif
+
+/* Define to `unsigned' if <sys/types.h> does not define. */
+/* #undef size_t */