X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=binaries%2Fsrc%2Fmuscle%2Fsubfam.cpp;h=e720cfa5b8e67071055544c7b972453493169585;hb=cfeb0f2ed902dac482a1e1d113e19c7dd6d6b247;hp=23f9473dbbbe3480acd4ba173f9580d15317e6dc;hpb=535359a3d592ee41bda72e7356f0181f6cee9d07;p=jabaws.git

diff --git a/binaries/src/muscle/subfam.cpp b/binaries/src/muscle/subfam.cpp
index 23f9473..e720cfa 100644
--- a/binaries/src/muscle/subfam.cpp
+++ b/binaries/src/muscle/subfam.cpp
@@ -170,7 +170,7 @@ void AlignSubFam(SeqVect &vAll, const Tree &GuideTree, unsigned uNodeIndex,
 	char CmdLine[4096];
 	sprintf(CmdLine, "probcons %s > %s 2> /dev/null", InTmp, OutTmp);
 //	sprintf(CmdLine, "muscle -in %s -out %s -maxiters 1", InTmp, OutTmp);
-	system(CmdLine);
+	int NotUsed = system(CmdLine);
 
 	TextFile fOut(OutTmp);
 	msaOut.FromFile(fOut);