X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=build.gradle;h=84c38db45b55018616f6ff30e89e4bdc40248342;hb=a9c365d7d21a454d1befb178a4286b6cede19d20;hp=1e26bee0d6d175a61912e4dec1d8b879bc495b69;hpb=521a4e4d610485cbd25d6ebf9dfefc2ad2cb21a0;p=jalview.git

diff --git a/build.gradle b/build.gradle
index 1e26bee..84c38db 100644
--- a/build.gradle
+++ b/build.gradle
@@ -19,7 +19,7 @@ plugins {
   id 'eclipse'
   id 'com.github.johnrengelman.shadow' version '4.0.3'
   id 'com.install4j.gradle' version '8.0.2'
-  id 'com.dorongold.task-tree' version '1.4' // only needed to display task dependency tree with  gradle task1 [task2 ...] taskTree
+  id 'com.dorongold.task-tree' version '1.5' // only needed to display task dependency tree with  gradle task1 [task2 ...] taskTree
 }
 
 repositories {
@@ -38,7 +38,7 @@ dependencies {
 
 // in ext the values are cast to Object. Ensure string values are cast as String (and not GStringImpl) for later use
 def string(Object o) {
-  return o.toString()
+  return o == null ? "" : o.toString()
 }
 
 
@@ -56,10 +56,12 @@ ext {
       localPropsFIS.close()
       p.each {
         key, val -> 
-          def over = getProperty(key) != null
+          def oldval = findProperty(key)
           setProperty(key, val)
-          if (over) {
-            println("Overriding property '${key}' with local.properties value '${val}'")
+          if (oldval != null) {
+            println("Overriding property '${key}' ('${oldval}') with local.properties value '${val}'")
+          } else {
+            println("Setting unknown property '${key}' with local.properties value '${val}'")
           }
       }
     } catch (Exception e) {
@@ -115,39 +117,36 @@ ext {
   classes = classesDir
 
   getdownWebsiteDir = string("${jalviewDir}/${getdown_website_dir}/${JAVA_VERSION}")
-  getdownDir = string("")
-  reportRsyncCmd = false
   buildDist = true
-  buildProperties = build_properties_file
+
+  // the following values might be overridden by the CHANNEL switch
+  getdownChannelName = CHANNEL.toLowerCase()
+  getdownDir = string("${getdownChannelName}/${JAVA_VERSION}")
+  getdownAppBase = string("${getdown_channel_base}/${getdownDir}")
   getdownLauncher = string("${jalviewDir}/${getdown_lib_dir}/${getdown_launcher}")
+  getdownAppDistDir = getdown_app_dir_alt
+  buildProperties = string("${classesDir}/${build_properties_file}")
+  reportRsyncCmd = false
   switch (CHANNEL) {
 
     case "BUILD":
     // TODO: get bamboo build artifact URL for getdown artifacts
     getdown_channel_base = bamboo_channelbase
-    getdown_channel_name = string("${bamboo_planKey}/${JAVA_VERSION}")
-    getdown_app_base = string("${bamboo_channelbase}/${bamboo_planKey}${bamboo_getdown_channel_suffix}/${JAVA_VERSION}")
-    getdown_app_dir = getdown_app_dir_alt
-    buildProperties = string("${classesDir}/${build_properties_file}")
+    getdownChannelName = string("${bamboo_planKey}/${JAVA_VERSION}")
+    getdownAppBase = string("${bamboo_channelbase}/${bamboo_planKey}${bamboo_getdown_channel_suffix}/${JAVA_VERSION}")
     break
 
     case "RELEASE":
-    getdown_channel_name = CHANNEL.toLowerCase()
-    getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
-    getdown_app_base = string("${getdown_channel_base}/${getdownDir}")
-    getdown_app_dir = getdown_app_dir_release
-    buildProperties = string("${classesDir}/${build_properties_file}")
+    getdownAppDistDir = getdown_app_dir_release
     reportRsyncCommand = true
     break
 
     case "ARCHIVE":
-    getdown_channel_name = CHANNEL.toLowerCase()+"/${JALVIEW_VERSION}"
-    getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
-    getdown_app_base = string("${getdown_channel_base}/${getdownDir}")
-    getdown_app_dir = getdown_app_dir_alt
+    getdownChannelName = CHANNEL.toLowerCase()+"/${JALVIEW_VERSION}"
+    getdownDir = string("${getdownChannelName}/${JAVA_VERSION}")
+    getdownAppBase = string("${getdown_channel_base}/${getdownDir}")
     if (!file("${ARCHIVEDIR}/${packageDir}").exists()) {
-      print "Must provide an ARCHIVEDIR value to produce an archive distribution"
-      exit
+      throw new GradleException("Must provide an ARCHIVEDIR value to produce an archive distribution")
     } else {
       packageDir = string("${ARCHIVEDIR}/${packageDir}")
       buildProperties = string("${ARCHIVEDIR}/${classes_dir}/${build_properties_file}")
@@ -157,13 +156,11 @@ ext {
     break
 
     case "ARCHIVELOCAL":
-    getdown_channel_name = string("archive/${JALVIEW_VERSION}")
-    getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
-    getdown_app_base = file(getdownWebsiteDir).toURI().toString()
-    getdown_app_dir = getdown_app_dir_alt
+    getdownChannelName = string("archive/${JALVIEW_VERSION}")
+    getdownDir = string("${getdownChannelName}/${JAVA_VERSION}")
+    getdownAppBase = file(getdownWebsiteDir).toURI().toString()
     if (!file("${ARCHIVEDIR}/${packageDir}").exists()) {
-      print "Must provide an ARCHIVEDIR value to produce an archive distribution"
-      exit
+      throw new GradleException("Must provide an ARCHIVEDIR value to produce an archive distribution")
     } else {
       packageDir = string("${ARCHIVEDIR}/${packageDir}")
       buildProperties = string("${ARCHIVEDIR}/${classes_dir}/${build_properties_file}")
@@ -174,52 +171,37 @@ ext {
     break
 
     case "DEVELOP":
-    getdown_channel_name = CHANNEL.toLowerCase()
-    getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
-    getdown_app_base = string("${getdown_channel_base}/${getdownDir}")
-    getdown_app_dir = getdown_app_dir_alt
-    buildProperties = string("${classesDir}/${build_properties_file}")
     reportRsyncCommand = true
     break
 
     case "TEST-RELEASE":
-    getdown_channel_name = CHANNEL.toLowerCase()
-    getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
-    getdown_app_base = string("${getdown_channel_base}/${getdownDir}")
-    getdown_app_dir = getdown_app_dir_alt
-    buildProperties = string("${classesDir}/${build_properties_file}")
     reportRsyncCommand = true
     break
 
     case ~/^SCRATCH(|-[-\w]*)$/:
-    getdown_channel_name = CHANNEL
-    getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
-    getdown_app_base = string("${getdown_channel_base}/${getdownDir}")
-    getdown_app_dir = getdown_app_dir_alt
-    buildProperties = string("${classesDir}/${build_properties_file}")
+    getdownChannelName = CHANNEL
+    getdownDir = string("${getdownChannelName}/${JAVA_VERSION}")
+    getdownAppBase = string("${getdown_channel_base}/${getdownDir}")
     reportRsyncCommand = true
     break
 
     case "LOCAL":
-    getdown_app_base = file(getdownWebsiteDir).toURI().toString()
-    getdown_app_dir = getdown_app_dir_alt
-    buildProperties = string("${classesDir}/${build_properties_file}")
+    getdownAppBase = file(getdownWebsiteDir).toURI().toString()
     getdownLauncher = string("${jalviewDir}/${getdown_lib_dir}/${getdown_launcher_local}")
     break
 
     default: // something wrong specified
-    println("CHANNEL must be one of BUILD, RELEASE, ARCHIVE, DEVELOP, TEST-RELEASE, SCRATCH-..., LOCAL [default]")
-    exit
+    throw new GradleException("CHANNEL must be one of BUILD, RELEASE, ARCHIVE, DEVELOP, TEST-RELEASE, SCRATCH-..., LOCAL [default]")
     break
 
   }
-  // override getdown_app_base if requested
-  if (getProperty("getdown_appbase_override") != null) {
-    getdown_app_base = string(getProperty("getdown_appbase_override"))
-    println("Overriding getdown appbase with '${getdown_app_base}'")
+  // override getdownAppBase if requested
+  if (findProperty("getdown_appbase_override") != null) {
+    getdownAppBase = string(getProperty("getdown_appbase_override"))
+    println("Overriding getdown appbase with '${getdownAppBase}'")
   }
 
-  getdownAppDir = string("${getdownWebsiteDir}/${getdown_app_dir}")
+  getdownAppDir = string("${getdownWebsiteDir}/${getdownAppDistDir}")
   //getdownJ11libDir = "${getdownWebsiteDir}/${getdown_j11lib_dir}"
   getdownResourceDir = string("${getdownWebsiteDir}/${getdown_resource_dir}")
   getdownInstallDir = string("${getdownWebsiteDir}/${getdown_install_dir}")
@@ -244,22 +226,22 @@ ext {
     compile_source_compatibility = 1.8
     compile_target_compatibility = 1.8
     // these are getdown.txt properties defined dependent on the JAVA_VERSION
-    getdown_alt_java_min_version = getdown_alt_java8_min_version
-    getdown_alt_java_max_version = getdown_alt_java8_max_version
+    getdownAltJavaMinVersion = string(findProperty("getdown_alt_java8_min_version"))
+    getdownAltJavaMaxVersion = string(findProperty("getdown_alt_java8_max_version"))
     // this property is assigned below and expanded to multiple lines in the getdown task
-    getdown_alt_multi_java_location = getdown_alt_java8_txt_multi_java_location
+    getdownAltMultiJavaLocation = string(findProperty("getdown_alt_java8_txt_multi_java_location"))
     // this property is for the Java library used in eclipse
-    eclipse_java_runtime_name = string("JavaSE-1.8")
+    eclipseJavaRuntimeName = string("JavaSE-1.8")
   } else if (JAVA_VERSION.equals("11")) {
     JAVA_INTEGER_VERSION = string("11")
     libDir = j11libDir
     libDistDir = j11libDir
     compile_source_compatibility = 11
     compile_target_compatibility = 11
-    getdown_alt_java_min_version = getdown_alt_java11_min_version
-    getdown_alt_java_max_version = getdown_alt_java11_max_version
-    getdown_alt_multi_java_location = getdown_alt_java11_txt_multi_java_location
-    eclipse_java_runtime_name = string("JavaSE-11")
+    getdownAltJavaMinVersion = string(findProperty("getdown_alt_java11_min_version"))
+    getdownAltJavaMaxVersion = string(findProperty("getdown_alt_java11_max_version"))
+    getdownAltMultiJavaLocation = string(findProperty("getdown_alt_java11_txt_multi_java_location"))
+    eclipseJavaRuntimeName = string("JavaSE-11")
     /* compile without modules -- using classpath libraries
     additional_compiler_args += [
     '--module-path', modules_compileClasspath.asPath,
@@ -272,10 +254,10 @@ ext {
     libDistDir = j11libDir
     compile_source_compatibility = JAVA_VERSION
     compile_target_compatibility = JAVA_VERSION
-    getdown_alt_java_min_version = getdown_alt_java11_min_version
-    getdown_alt_java_max_version = getdown_alt_java11_max_version
-    getdown_alt_multi_java_location = getdown_alt_java11_txt_multi_java_location
-    eclipse_java_runtime_name = string("JavaSE-11")
+    getdownAltJavaMinVersion = string(findProperty("getdown_alt_java11_min_version"))
+    getdownAltJavaMaxVersion = string(findProperty("getdown_alt_java11_max_version"))
+    getdownAltMultiJavaLocation = string(findProperty("getdown_alt_java11_txt_multi_java_location"))
+    eclipseJavaRuntimeName = string("JavaSE-11")
     /* compile without modules -- using classpath libraries
     additional_compiler_args += [
     '--module-path', modules_compileClasspath.asPath,
@@ -290,10 +272,16 @@ ext {
   // for install4j
   JAVA_MIN_VERSION = JAVA_VERSION
   JAVA_MAX_VERSION = JAVA_VERSION
-  macosJavaVMDir = string("${System.env.HOME}/buildtools/jre/openjdk-java_vm/getdown/macos-jre${JAVA_VERSION}/jre")
-  macosJavaVMTgz = string("${System.env.HOME}/buildtools/jre/openjdk-java_vm/install4j/tgz/macos-jre${JAVA_VERSION}.tar.gz")
-  windowsJavaVMDir = string("${System.env.HOME}/buildtools/jre/openjdk-java_vm/getdown/windows-jre${JAVA_VERSION}/jre")
-  windowsJavaVMTgz = string("${System.env.HOME}/buildtools/jre/openjdk-java_vm/install4j/tgz/windows-jre${JAVA_VERSION}.tar.gz")
+  def jreInstallsDir = string(jre_installs_dir)
+  if (jreInstallsDir.startsWith("~/")) {
+    jreInstallsDir = System.getProperty("user.home") + jreInstallsDir.substring(1)
+  }
+  macosJavaVMDir = string("${jreInstallsDir}/jre-${JAVA_INTEGER_VERSION}-mac-x64/jre")
+  macosJavaVMTgz = string("${jreInstallsDir}/tgz/jre-${JAVA_INTEGER_VERSION}-mac-x64.tar.gz")
+  windowsJavaVMDir = string("${jreInstallsDir}/jre-${JAVA_INTEGER_VERSION}-windows-x64/jre")
+  windowsJavaVMTgz = string("${jreInstallsDir}/tgz/jre-${JAVA_INTEGER_VERSION}-windows-x64.tar.gz")
+  linuxJavaVMDir = string("${jreInstallsDir}/jre-${JAVA_INTEGER_VERSION}-linux-x64/jre")
+  linuxJavaVMTgz = string("${jreInstallsDir}/tgz/jre-${JAVA_INTEGER_VERSION}-linux-x64.tar.gz")
   install4jDir = string("${jalviewDir}/${install4j_utils_dir}")
   install4jConfFileName = string("jalview-install4j-conf.install4j")
   install4jConfFile = file("${install4jDir}/${install4jConfFileName}")
@@ -522,7 +510,7 @@ eclipse {
     // for the IDE, use java 11 compatibility
     sourceCompatibility = compile_source_compatibility
     targetCompatibility = compile_target_compatibility
-    javaRuntimeName = eclipse_java_runtime_name
+    javaRuntimeName = eclipseJavaRuntimeName
 
     // add in jalview project specific properties/preferences into eclipse core preferences
     file {
@@ -713,7 +701,8 @@ task convertBuildingMD(type: Exec) {
   }
 
   def hostname = "hostname".execute().text.trim()
-  if ((pandoc == null || ! file(pandoc).exists()) && hostname.equals("jv-bamboo")) {
+  def buildtoolsPandoc = System.getProperty("user.home")+"/buildtools/pandoc/bin/pandoc"
+  if ((pandoc == null || ! file(pandoc).exists()) && file(buildtoolsPandoc).exists()) {
     pandoc = System.getProperty("user.home")+"/buildtools/pandoc/bin/pandoc"
   }
 
@@ -986,7 +975,6 @@ task getdownWebsite() {
   def getdownWebsiteResourceFilenames = []
   def getdownTextString = ""
   def getdownResourceDir = getdownResourceDir
-  def getdownAppDir = getdownAppDir
   def getdownResourceFilenames = []
 
   doFirst {
@@ -999,19 +987,21 @@ task getdownWebsite() {
       rename(build_properties_file, getdown_build_properties)
       into getdownAppDir
     }
-    getdownWebsiteResourceFilenames += "${getdown_app_dir}/${getdown_build_properties}"
+    getdownWebsiteResourceFilenames += "${getdownAppDistDir}/${getdown_build_properties}"
 
     // go through properties looking for getdown_txt_...
     def props = project.properties.sort { it.key }
-    if (getdown_alt_java_min_version.length() > 0) {
-      props.put("getdown_txt_java_min_version", getdown_alt_java_min_version)
+    if (getdownAltJavaMinVersion != null && getdownAltJavaMinVersion.length() > 0) {
+      props.put("getdown_txt_java_min_version", getdownAltJavaMinVersion)
+    }
+    if (getdownAltJavaMaxVersion != null && getdownAltJavaMaxVersion.length() > 0) {
+      props.put("getdown_txt_java_max_version", getdownAltJavaMaxVersion)
     }
-    if (getdown_alt_java_max_version.length() > 0) {
-      props.put("getdown_txt_java_max_version", getdown_alt_java_max_version)
+    if (getdownAltMultiJavaLocation != null && getdownAltMultiJavaLocation.length() > 0) {
+      props.put("getdown_txt_multi_java_location", getdownAltMultiJavaLocation)
     }
-    props.put("getdown_txt_multi_java_location", getdown_alt_multi_java_location)
 
-    props.put("getdown_txt_appbase", getdown_app_base)
+    props.put("getdown_txt_appbase", getdownAppBase)
     props.each{ prop, val ->
       if (prop.startsWith("getdown_txt_") && val != null) {
         if (prop.startsWith("getdown_txt_multi_")) {
@@ -1066,7 +1056,7 @@ task getdownWebsite() {
     }
     codeFiles.sort().each{f ->
       def name = f.getName()
-      def line = "code = ${getdown_app_dir}/${name}\n"
+      def line = "code = ${getdownAppDistDir}/${name}\n"
       getdownTextString += line
       copy {
         from f.getPath()
@@ -1098,6 +1088,7 @@ task getdownWebsite() {
     def getdown_txt = file("${getdownWebsiteDir}/getdown.txt")
     getdown_txt.write(getdownTextString)
 
+    def getdownLaunchJvl = ( (getdownChannelName != null && getdownChannelName.length() > 0)?"${getdownChannelName}_":"" ) + getdown_launch_jvl
     def launch_jvl = file("${getdownWebsiteDir}/${getdown_launch_jvl}")
     launch_jvl.write("appbase="+props.get("getdown_txt_appbase"))
 
@@ -1162,7 +1153,7 @@ task getdownDigest(type: JavaExec) {
   description = "Digest the getdown website folder"
   dependsOn getdownWebsite
   doFirst {
-    classpath = files("${getdownWebsiteDir}/${getdown_launcher}")
+    classpath = files(getdownLauncher)
   }
   main = "com.threerings.getdown.tools.Digester"
   args getdownWebsiteDir
@@ -1284,8 +1275,11 @@ task installers(type: com.install4j.gradle.Install4jTask) {
     filesMd5 = filesMd5.substring(0,8)
   }
   def install4jTemplateVersion = "${JALVIEW_VERSION}_F${filesMd5}_C${gitHash}"
+  // make install4jBuildDir relative to jalviewDir
+  def install4jBuildDir = "${install4j_build_dir}/${JAVA_VERSION}"
 
   variables = [
+    'JALVIEW_DIR': "../..",
     'OSX_KEYSTORE': OSX_KEYSTORE,
     'JSIGN_SH': JSIGN_SH,
     'JRE_DIR': getdown_app_dir_java,
@@ -1297,19 +1291,25 @@ task installers(type: com.install4j.gradle.Install4jTask) {
     'JAVA_INTEGER_VERSION': JAVA_INTEGER_VERSION,
     'VERSION': JALVIEW_VERSION,
     'MACOS_JAVA_VM_DIR': macosJavaVMDir,
-    'MACOS_JAVA_VM_TGZ': macosJavaVMTgz,
     'WINDOWS_JAVA_VM_DIR': windowsJavaVMDir,
+    'LINUX_JAVA_VM_DIR': linuxJavaVMDir,
+    'MACOS_JAVA_VM_TGZ': macosJavaVMTgz,
     'WINDOWS_JAVA_VM_TGZ': windowsJavaVMTgz,
+    'LINUX_JAVA_VM_TGZ': linuxJavaVMTgz,
     'COPYRIGHT_MESSAGE': install4j_copyright_message,
     'MACOS_BUNDLE_ID': install4j_macOS_bundle_id,
+    'INSTALL4J_UTILS_DIR': install4j_utils_dir,
+    'GETDOWN_WEBSITE_DIR': getdown_website_dir,
+    'GETDOWN_FILES_DIR': getdown_files_dir,
     'GETDOWN_RESOURCE_DIR': getdown_resource_dir,
-    'GETDOWN_DIST_DIR': getdown_app_dir,
+    'GETDOWN_DIST_DIR': getdownAppDistDir,
     'GETDOWN_ALT_DIR': getdown_app_dir_alt,
     'GETDOWN_INSTALL_DIR': getdown_install_dir,
     'INFO_PLIST_FILE_ASSOCIATIONS_FILE': install4j_info_plist_file_associations,
+    'BUILD_DIR': install4jBuildDir,
   ]
 
-  destination = "${jalviewDir}/${install4j_build_dir}/${JAVA_VERSION}"
+  destination = "${jalviewDir}/${install4jBuildDir}"
   buildSelected = true
 
   if (install4j_faster.equals("true") || CHANNEL.startsWith("DEVELOP") || CHANNEL.startsWith("LOCAL")) {