X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=conf%2Fsettings%2FAAConLimits.xml;h=6a3b1c2c327dfe2c4085ea948187643a3498051a;hb=ee037b551494b3c8095d51bb3075f6fafb592c70;hp=a3e49353671add4ab5db524d10f063b180b0acaf;hpb=fab6bab770b548a0c99ed6f5dfb46f5aa99f67c7;p=jabaws.git

diff --git a/conf/settings/AAConLimits.xml b/conf/settings/AAConLimits.xml
index a3e4935..6a3b1c2 100644
--- a/conf/settings/AAConLimits.xml
+++ b/conf/settings/AAConLimits.xml
@@ -1,13 +1,30 @@
 <?xml version="1.0" encoding="US-ASCII" standalone="yes"?>
 <limits>
- <runnerClassName>compbio.runner.conservation.AACon</runnerClassName>
-	<limit isDefault="true">
-		<seqNumber>100000</seqNumber>
-		<seqLength>100000</seqLength>
-	</limit>
-	<limit isDefault="false">
-		<preset># LocalEngineExecutionLimit #</preset>
-		<seqNumber>1000</seqNumber>
-		<seqLength>1000</seqLength>
-	</limit>
+     <runnerClassName>compbio.runner.conservation.AACon</runnerClassName>
+    <limit isDefault="true">
+        <seqNumber>5000</seqNumber>
+        <seqLength>1000</seqLength>
+    </limit>
+    <limit isDefault="false">
+        <preset># LocalEngineExecutionLimit #</preset>
+        <seqNumber>200</seqNumber>
+        <seqLength>400</seqLength>
+    </limit>
+
+    <!-- Limits for presets    -->
+    <limit isDefault="false">
+        <preset>Quick conservation</preset>
+        <seqNumber>10000</seqNumber>
+        <seqLength>10000</seqLength>
+    </limit>
+    <limit isDefault="false">
+        <preset>Slow conservation</preset>
+        <seqNumber>2000</seqNumber>
+        <seqLength>1000</seqLength>
+    </limit>
+    <limit isDefault="false">
+        <preset>Complete conservation</preset>
+        <seqNumber>2000</seqNumber>
+        <seqLength>1000</seqLength>
+    </limit>
 </limits>