X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=conf%2Fsettings%2FIUPredParameters.xml;h=eb485c8db2b1a55278b630ad2e1592b8f15aebe2;hb=55c98899ff648c53c8d53fe308c4b26f8d6f9468;hp=1846cadb7c5f7e1632ea04d4c0e8732341879852;hpb=4e6b482a5d99c5741394778d787986a4a67da403;p=jabaws.git

diff --git a/conf/settings/IUPredParameters.xml b/conf/settings/IUPredParameters.xml
index 1846cad..eb485c8 100644
--- a/conf/settings/IUPredParameters.xml
+++ b/conf/settings/IUPredParameters.xml
@@ -1,12 +1,15 @@
 <?xml version="1.0" encoding="US-ASCII" standalone="yes"?>
 <runnerConfig>
-	<runnerClassName>compbio.runner.disorder.Disembl</runnerClassName>
+	<runnerClassName>compbio.runner.disorder.IUPred</runnerClassName>
 	<options isRequired="true">
         <name>Disorder type</name>
-        <description></description>
+        <description> "Long" - for prediction of long disordered regions, "short" - for 
+        prediction of short disordered regions ( e.g. missing residues in
+  X-ray structures) and "glob" for predicting globular domains. "All" for all methods</description>
         <optionNames>short</optionNames>
         <optionNames>long</optionNames>
         <optionNames>glob</optionNames>
+        <optionNames>all</optionNames>
         <furtherDetails>prog_docs/iupred.txt</furtherDetails>
         <defaultValue>long</defaultValue>
     </options>