X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=datadb%2Fcompbio%2Fcassandra%2FJpredParserHTTP.java;h=d221209a7962142ce309b70f67dc1df68cdf003c;hb=006363dc999cef4e9c49dd6a38ea0d78cbb62472;hp=453f01f73e9728d8691a01e8a5e87bb429c31226;hpb=6823d2f36ff55b7ab11d674e3fe4d04dc57d6bbf;p=proteocache.git diff --git a/datadb/compbio/cassandra/JpredParserHTTP.java b/datadb/compbio/cassandra/JpredParserHTTP.java index 453f01f..d221209 100644 --- a/datadb/compbio/cassandra/JpredParserHTTP.java +++ b/datadb/compbio/cassandra/JpredParserHTTP.java @@ -93,6 +93,7 @@ public class JpredParserHTTP implements JpredParser { } return protein; } + private String parseSeqFile(final InputStream stream, String jobid) throws FileNotFoundException { final FastaReader fr = new FastaReader(stream); String protein = "";