X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=doc%2FJalviewRNASupport.html;h=4c0500a1762a78d11d1514e968dbcb9998d56e93;hb=dc5a5883cfe90255079e41538e56bc433bd1e4a5;hp=d96cca53381bf60b9474930a38b0116393dbad9d;hpb=61aa402837621b3e80ec61d56152ea0c858b319d;p=jalview.git
diff --git a/doc/JalviewRNASupport.html b/doc/JalviewRNASupport.html
index d96cca5..4c0500a 100644
--- a/doc/JalviewRNASupport.html
+++ b/doc/JalviewRNASupport.html
@@ -1,20 +1,21 @@
Jalview RNA Support
@@ -22,11 +23,10 @@
Jalview RNA Support
-Jalview RNA support has been added in part during a
-Google Summer of Code Project.
-More information about this project can be found at the
-
-NESCent wiki page and the project blog.
+Jalview RNA support was first added during a
+2010 Google Summer of Code Project by
+Lauren Lui (see her
+NESCent wiki page and the project blog).
What was added
@@ -39,6 +39,16 @@ NESCent wiki page and the project GSOC to extend Lauren's work, with support for viewing secondary structure in VARNA and visualizing base pair contact conservation.
+
+What Jan added
+
+
+- Enable RNA secondary structure annotation to be imported/exported through Jalview annotation files
+- Incorporated VARNA into the desktop application
+- Added a new base pair consensus histogram and sequence logo annotation row
+
+
TODO
Secondary Structure Visualization/Annotation
@@ -47,7 +57,6 @@ annotation panel.
- Editing of secondary structure line
- Update helix colouring when secondary structure changes.
- Support per sequence in RNA secondary structure annotation
-- Enable RNA secondary structure annotation to be imported/exported through Jalview annotation files
Colour schemes