X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=doc%2Fbuilding.html;h=f07e2d8f62f2cadc478ed85f4ed226b784585bce;hb=cb5d856b1304448cae13a333cbd9017f81520d90;hp=fd09167bc0ba0de9e2c3d38fd573b50ef0f67f61;hpb=153dd62dc91da13ae732600e6ea55ddbe15eab39;p=jalview.git diff --git a/doc/building.html b/doc/building.html index fd09167..f07e2d8 100755 --- a/doc/building.html +++ b/doc/building.html @@ -1,20 +1,21 @@ Building Jalview from Source @@ -25,14 +26,13 @@

You will need the following (hopefully):

With any luck, after setting your paths and JAVA_HOME correctly, you just need to change to the Jalview directory and run ant (this works -from JBuilder and eclipse too). +from JBuilder and eclipse too, but NetBeans is a bit trickier). 
    ant
@@ -62,9 +62,36 @@ ant makedist key) -

- -

+

+ Building the JalviewLite applet
+ The JalviewLite applet is compiled using a subset of the packages in + the src directory (specifically: MCView, and jalview.{datamodel, + analysis, appletgui, utils, schemes, api, structure}, and + com.stevesoft.*). Once compiled, these class files are obfuscated to + make the code run efficiently. To compile the applet Jar, use the + makeApplet task - optionally passing in a 'donotobfuscate' property to + the ant build (e.g. -Ddonotobfuscate=true) to disable obfuscation.

+ The ant target 'pubapplet' can be used to compile install the + jalviewApplet.jar and any dependent jars (under appletlib) into a copy + of the examples directory created under the outputDir build + property (which defaults to the 'dist' directory). +

+

+

using IDEs to build Jalview

+

The Jalview source distribution includes project definitions for + Eclipse, Netbeans and some rather ancient Borland JBuilder .jpx + project files. These files should be sufficient to set up basic source + folders and build paths, but you will need to ensure that all .jar + files in the lib and appletlib directories are added to the build path + for your IDE project, and that the 'buildindices' target in Jalview's + build.xml is executed with the 'outputDir' ant property set to the + directory where the IDE expects to place compiled classes ('classes' + directory for eclipse, 'build/classes' for netbeans).

+

Note: It is generally not recommended that you distribute build + artefacts that were generated automatically via an IDE's own packaging + mechanism (e.g. Netbeans' executable Jar and dependent lib directory). + The hand-crafted ant build.xml is (currently) the only officially + supported method of building distributable versions of Jalview.

Jalview development team