X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=doc%2Findex.html;h=4b43977f06732c39ef07174646bcb2bfd89c64d7;hb=b638a305a88456b3bed6a88676c75ddb8b2ecaa0;hp=c1e3718eabee2b98fc1bd388d6972c1aa8407d44;hpb=c53aeee9a688f68d64106a968876e542f701fbc6;p=jalview.git
diff --git a/doc/index.html b/doc/index.html
index c1e3718..4b43977 100644
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+++ b/doc/index.html
@@ -1,7 +1,7 @@
+-->
Jalview Source Documentation
@@ -32,11 +32,12 @@ Jalview Source Documentation
information about each task, and there's lots of comments too.
src - all jalview source packages, including any specially
- adapted code from other GPL programs. See Jalvew
+ adapted code from other GPL programs. See Jalview
Development for more info.
lib - All the libraries that Jalview depends on. Every jar
file in this directory should be added to the classpath when building
or running the jalview application.
+ appletlib - Any libraries that are specifically required for compiling and/or running the jalviewLite applet (e.g. an applet build of Jmol).
help - the jalview JavaHelp documents
- help.hs - the main index page. This is generated by the
@@ -137,12 +138,15 @@ Jalview Source Documentation
documentation.
- dist - where the Jars and JNLP file for the java webstart distribution is generated.
installAnywhere - where the installAnywhere build is generated
keys - you might not have this - see building for info on how to create it.
-
-
+dist - where the Jars and JNLP file for the java webstart distribution is generated, and where a copy of the examples directory is created complete with jalviewApplet.jar and the contents of appletlib/*.jar.
+examples - a set of example jalview projects and web pages demonstrating the jalviewLite applet. This is essentially mirrors the www.jalview.org/examples directory on Jalview's website.
+nbbuild.xml - custom config used by the vanilla netbeans project in nbproject
+nbproject - vanilla netbeans project
+JalviewApplet.jpx, JalviewX.jpx - old JBuilder project files
+.project - eclipse .project definition