X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=doc%2Findex.html;h=fcc01fe6e9994e28cb8bc783166003c073d5f9b5;hb=5aad8085fbd06d2e0f6a97d71e8ed58d0e02e6db;hp=ab12d5e026989de2a95899dab752e77696d0b7e2;hpb=e944b72a600a30c630e842d70b0a1e1916859315;p=jalview.git diff --git a/doc/index.html b/doc/index.html index ab12d5e..fcc01fe 100644 --- a/doc/index.html +++ b/doc/index.html @@ -1,4 +1,21 @@ + Jalview Source Documentation @@ -15,11 +32,12 @@ Jalview Source Documentation information about each task, and there's lots of comments too.
  • src - all jalview source packages, including any specially - adapted code from other GPL programs. See Jalvew + adapted code from other GPL programs. See Jalview Development for more info.
  • lib - All the libraries that Jalview depends on. Every jar file in this directory should be added to the classpath when building or running the jalview application.
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  • appletlib - Any libraries that are specifically required for compiling and/or running the jalviewLite applet (e.g. an applet build of Jmol).
  • help - the jalview JavaHelp documents
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  • dist - where the Jars and JNLP file for the java webstart distribution is generated.
  • installAnywhere - where the installAnywhere build is generated
  • keys - you might not have this - see building for info on how to create it.
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  • dist - where the Jars and JNLP file for the java webstart distribution is generated, and where a copy of the examples directory is created complete with jalviewApplet.jar and the contents of appletlib/*.jar.
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  • examples - a set of example jalview projects and web pages demonstrating the jalviewLite applet. This is essentially mirrors the www.jalview.org/examples directory on Jalview's website.
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  • nbbuild.xml - custom config used by the vanilla netbeans project in nbproject
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  • nbproject - vanilla netbeans project
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  • JalviewApplet.jpx, JalviewX.jpx - old JBuilder project files
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  • .project - eclipse .project definition
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