X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=doc%2Findex.html;h=fcc01fe6e9994e28cb8bc783166003c073d5f9b5;hb=ba085b0611979fc641da5bb1abe4995a57b57629;hp=ab12d5e026989de2a95899dab752e77696d0b7e2;hpb=e944b72a600a30c630e842d70b0a1e1916859315;p=jalview.git
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@@ -1,4 +1,21 @@
+
Jalview Source Documentation
@@ -15,11 +32,12 @@ Jalview Source Documentation
information about each task, and there's lots of comments too.
src - all jalview source packages, including any specially
- adapted code from other GPL programs. See Jalvew
+ adapted code from other GPL programs. See Jalview
Development for more info.
lib - All the libraries that Jalview depends on. Every jar
file in this directory should be added to the classpath when building
or running the jalview application.
+ appletlib - Any libraries that are specifically required for compiling and/or running the jalviewLite applet (e.g. an applet build of Jmol).
help - the jalview JavaHelp documents
- help.hs - the main index page. This is generated by the
@@ -120,13 +138,16 @@ Jalview Source Documentation
documentation.
- dist - where the Jars and JNLP file for the java webstart distribution is generated.
installAnywhere - where the installAnywhere build is generated
keys - you might not have this - see building for info on how to create it.
-
-
+dist - where the Jars and JNLP file for the java webstart distribution is generated, and where a copy of the examples directory is created complete with jalviewApplet.jar and the contents of appletlib/*.jar.
+examples - a set of example jalview projects and web pages demonstrating the jalviewLite applet. This is essentially mirrors the www.jalview.org/examples directory on Jalview's website.
+nbbuild.xml - custom config used by the vanilla netbeans project in nbproject
+nbproject - vanilla netbeans project
+JalviewApplet.jpx, JalviewX.jpx - old JBuilder project files
+.project - eclipse .project definition
-
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+