JalviewLite Examples

- + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. +--> -

- Examples aren't working ?
Try the unsigned applet demos -

Quick Links to jars for example:
jalviewApplet.jar and JmolApplet.jar

@@ -176,9 +31,9 @@ var _gaq = _gaq || [];_gaq.push(["_setAccount", "UA-9060947-1"]);_gaq.push(["_tr

JalviewLite Button Examples

Try out JalviewLite by pressing one of the buttons below.
- For more information on how to use the applet in your website, see the applet parameters and other documentation in the links to the left.

+ For more information on how to use the applet in your website, see the applet parameters and other documentation in the links to the left.

Ferredoxins, chloroplast precursor related UniRef50 cluster

(15 sequences x 150 residues) @@ -186,26 +41,23 @@ Try out JalviewLite by pressing one of the buttons below.

- - - - - - - - - - - - - - - + + + + + + + + + + + + + + +	User Defined Colours, loads an associated Newick format tree file which is used to sort the alignment, and @@ -214,7 +66,7 @@ Try out JalviewLite by pressing one of the buttons below.
+ archive="jalviewApplet.jar,JmolApplet-12.2.4.jar,java-json.jar,json_simple-1.1.jar"> @@ -239,7 +91,7 @@ Try out JalviewLite by pressing one of the buttons below.
+ archive="jalviewApplet.jar,JmolApplet-12.2.4.jar,java-json.jar,json_simple-1.1.jar"> @@ -248,6 +100,7 @@ Try out JalviewLite by pressing one of the buttons below. + @@ -264,9 +117,10 @@ Try out JalviewLite by pressing one of the buttons below.
+ archive="jalviewApplet.jar,JmolApplet-12.2.4.jar,java-json.jar,json_simple-1.1.jar"> + @@ -294,7 +148,7 @@ Try out JalviewLite by pressing one of the buttons below.
+ archive="jalviewApplet.jar,JmolApplet-12.2.4.jar,java-json.jar,json_simple-1.1.jar"> @@ -310,30 +164,30 @@ Try out JalviewLite by pressing one of the buttons below. secondary structure annotation

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Linked amino acid and cDNA alignments for homologous proteins

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Displays a split window view of protein and its related cDNA