JalviewLite is a web based version of Jalview, which runs as a + Java applet in or on a web page. It's one of the easiest ways of + providing an interactive display for precalculated alignments, + features and annotations files. It lacks some functionality + available in the Jalview Desktop, however, such as making images, + saving files, and running web service jobs. This is mostly due to + security restrictions imposed on applets.
+
+ For more information on how to use the applet in your website, see full list of
+ applet
+ Pressing one of the buttons below will load up JalviewLite,
+ a cut down version parameters.
+
+
Ferredoxins, chloroplast precursor related UniRef50 + cluster
+(15 sequences x 150 residues) + +
+ | User Defined Colours, loads an associated + Newick format tree file which is used to sort the alignment, and + group consensus and sequence logos are shown below the alignment. | +
+ | Displays a features file on the alignment | +
+ | Associates PDB file 1GAQ with sequence + FER1_MAIZE | +
+ | Displays a Multiple Sequence Alignment + Based JNet Prediction for a Sequence | +
+
RF00031 RFAM Alignment with per seqeunce secondary + structure
+ ++ | Displays an RFAM RNA fold family with + secondary structure annotation | +