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JalviewLite is a web based version of Jalview, which runs as a Java applet in or on a web page. It's one of the easiest ways of providing an interactive
- display for precalculated alignments, features and annotations files.
- It lacks some functionality available in the Jalview Desktop, however, such
- as making images, saving files, and running web service jobs. This is mostly due to security
- restrictions imposed on applets.
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For more information on how to use the applet in your
- website, see full list of applet
- parameters.
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Pressing one of the buttons below will load up JalviewLite, a cut down version
- of Jalview, which runs within your web browser.
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Ferredoxins, chloroplast precursor related UniRef50
- cluster
- (15 sequences x 150 residues)
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- User Defined Colours, loads an associated Newick
- format tree file which is used to sort the alignment, and group consensus and sequence logos are shown below the alignment. |
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- Displays a features file on the alignment |
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- Associates PDB file 1GAQ with sequence FER1_MAIZE |
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- Displays a Multiple Sequence Alignment
- Based JNet Prediction for a Sequence |
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- Displays an RFAM RNA fold family with secondary structure annotation |
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For more JalviewLite examples, follow the links below.
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