X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2FestrogenReceptorCdna_frag.fa;h=c44766d5d29b81d46f7ba1d605b0d47ecfec2b0a;hb=9276cd700c1157d058538fc4e4676c3dce16deaa;hp=da5f5c881faec6e4abacd34dd49d41a44b8bd7d7;hpb=619cc880371f3228e6a1fb33c6bfb6e7a7e2622c;p=jalview.git diff --git a/examples/estrogenReceptorCdna_frag.fa b/examples/estrogenReceptorCdna_frag.fa index da5f5c8..c44766d 100644 --- a/examples/estrogenReceptorCdna_frag.fa +++ b/examples/estrogenReceptorCdna_frag.fa @@ -1,12 +1,32 @@ ->EMBLCDS|BAA89539/1111-1224 Anguilla japonica (Japanese eel) progesterone receptor +>EMBLCDS|ADZ17331/532-675 Homo sapiens (human) estrogen nuclear receptor beta variant a +caaggacataatgattatatttgtccagctacaaatcagtgtacaatcgataaaaaccggcgcaagagctgc +caggcctgccgacttcggaagtgttacgaagtgggaatggtgaagtgtggctcccggagagagagatgt--- +ggg +>EMBLCDS|AAK93056/430-576 Drosophila melanogaster (fruit fly) GH28308p +caaggcaacatcgagtacacgtgtccggcgaacaacgagtgtgagattaacaagcggagacgcaaggcctgc +caagcgtgtcgcttccagaaatgtctactaatgggcatgctcaaggagggtgtgcgcttggatcgagttcgt +gga +>EMBLCDS|BAA89539/1111-1254 Anguilla japonica (Japanese eel) progesterone receptor gaaggccatcataactacttgtgtgctggacggaatgactgcatcgtggacaagatccgtaggaaaaactgt -cctgcttgtcgcctcagaaagtgctaccaggcgggaatgata--- ->EMBLCDS|BAA75464/1564-1677 Anguilla japonica (Japanese eel) androgen receptor alpha +cctgcttgtcgcctcagaaagtgctaccaggcgggaatgatactgggaggtcggaagctgaagaagttg--- +ggg +>EMBLCDS|AHW56473/532-675 Homo sapiens (human) partial estrogen receptor 2 isoform A +caaggacataatgattatatttgtccagctacaaatcagtgtacaatcgataaaaaccggcgcaagagctgc +caggcctgccgacttcggaagtgttacgaagtgggaatggtgaagtgtggctcccggagagagagatgt--- +ggg +>EMBLCDS|BAA75464/1564-1683 Anguilla japonica (Japanese eel) androgen receptor alpha gaagggaaacagaagtacctgtgcgccagcatcaatgattgcaccattgataaacttcgaaggaagaactgc -ccctcttgccgtctcaaaaggtgctttgctgccggaatgacc--- ->EMBLCDS|AAA17402/70-183 Serinus canaria (common canary) partial androgen receptor +ccctcttgccgtctcaaaaggtgctttgctgccggaatgaccctt--------------------------- +gga +>EMBLCDS|AAA17402/70-189 Serinus canaria (common canary) partial androgen receptor gaaggtaaacagaagtacctctgtgccagccgcaacgactgcaccatcgacaagttccggcggaaaaactgc -ccctcctgccgcctgcgcaagtgctacgaggccgggatgacg--- ->EMBLCDS|AAK20929/592-708 Petromyzon marinus (sea lamprey) partial estrogen receptor +ccctcctgccgcctgcgcaagtgctacgaggccgggatgacgctt--------------------------- +gga +>EMBLCDS|AAL37553/430-576 Drosophila melanogaster (fruit fly) estrogen-related receptor +caaggcaacatcgagtacacgtgtccggcgaacaacgagtgtgagattaacaagcggagacgcaaggcctgc +caagcgtgtcgcttccagaaatgtctactaatgggcatgctcaaggagggtgtgcgcttggatcgagttcgt +gga +>EMBLCDS|AAK20929/592-732 Petromyzon marinus (sea lamprey) partial estrogen receptor caaggccacaatgactacatgtgcccggccaccaaccagtgcaccatcgacaggaaccgtcgcaagagctgt -caggcttgccgcctgcgtaagtgctacgaagtgggcatggtcaaa +caggcttgccgcctgcgtaagtgctacgaagtgggcatggtcaaa---ggcgttcgcaaggaccgcaaa--- +ggc