X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Fgroovy%2Fparseproperties.groovy;h=72dad0707dcf5af42d97c4096c12f10c51d652ba;hb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;hp=646ebf8ea824bee73dad56de19db348a2ef80658;hpb=1a6d20b15b2ba810bc807f76eb44ab1b9cc4482a;p=jalview.git diff --git a/examples/groovy/parseproperties.groovy b/examples/groovy/parseproperties.groovy index 646ebf8..72dad07 100644 --- a/examples/groovy/parseproperties.groovy +++ b/examples/groovy/parseproperties.groovy @@ -1,9 +1,29 @@ +/* + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9) + * Copyright (C) 2015 The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ import jalview.analysis.*; import jalview.datamodel.*; import jalview.gui.AlignFrame; import jalview.gui.AlignViewport; -def af = Jalview.getAlignframes(); +def af = Jalview.getAlignFrames(); def al = af[0].viewport.alignment; ParseProperties pp = new ParseProperties(al); pp.getScoresFromDescription("Score", "ScanPS Raw Score", "([-0-9.+]+)");