X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Fgroovy%2Fparseproperties.groovy;h=ceec6d2090c964ebbec2cd336b8d159a0f89b031;hb=c41f0715fd4f3c345c048a9ca558ee3e3364ffcd;hp=322d5e27915ccbe3797e84ede80c3d9ee0ae83be;hpb=25e2a6f59681e1e7d9602a451fbcf3a2b414a49a;p=jalview.git diff --git a/examples/groovy/parseproperties.groovy b/examples/groovy/parseproperties.groovy index 322d5e2..ceec6d2 100644 --- a/examples/groovy/parseproperties.groovy +++ b/examples/groovy/parseproperties.groovy @@ -23,8 +23,7 @@ import jalview.datamodel.*; import jalview.gui.AlignFrame; import jalview.gui.AlignViewport; -def af = Jalview.getAlignFrames(); -def al = af[0].viewport.alignment; +def al = Jalview.getCurrentAlignFrame().viewport.alignment; ParseProperties pp = new ParseProperties(al); pp.getScoresFromDescription("Score", "ScanPS Raw Score", "([-0-9.+]+)", true); def sqs = al.getSequenceAt(0);