X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Fgroovy%2Fprinttitle.groovy;h=b3387ea4290de48c7eb6cf0e58d7d34fc2f45e84;hb=refs%2Fheads%2Ffeature%2FJAL-3181linkOrdering;hp=348b40f6ec71ea62c5736f98020da8bbf5458b19;hpb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;p=jalview.git diff --git a/examples/groovy/printtitle.groovy b/examples/groovy/printtitle.groovy index 348b40f..b3387ea 100644 --- a/examples/groovy/printtitle.groovy +++ b/examples/groovy/printtitle.groovy @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9) - * Copyright (C) 2015 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -19,14 +19,17 @@ * The Jalview Authors are detailed in the 'AUTHORS' file. */ // do something groovy in jalview -print "Hello World.\n"; -def alf = Jalview.getAlignFrames(); +println "Hello World.\n" +println "First sequence is " + currentAlFrame.viewport.alignment.getSequenceAt(0).getDisplayId(true) + +def alf = Jalview.getAlignFrames() for (ala in alf) { // ala is an jalview.gui.AlignFrame object - print ala.getTitle()+"\n"; + println ala.getTitle() // get the parent jalview.datamodel.Alignment from the alignment viewport - def alignment = ala.viewport.alignment; + def alignment = ala.viewport.alignment // get the first sequence from the jalview.datamodel.Alignment object - def seq = alignment.getSequenceAt(0); + def seq = alignment.getSequenceAt(0) } +Jalview.quit()