X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2FjalviewLiteJs.html;h=197ef56e8a2ef829b675d9c35e49d779e5361457;hb=9d2628ef9266d6c7a953c8fd6e5539069e5997b3;hp=2a90393e2e630751650e3d69e0c2acb0928bd5e6;hpb=9e3e20c98eae9498a68bb0a770359564797a12ef;p=jalview.git diff --git a/examples/jalviewLiteJs.html b/examples/jalviewLiteJs.html index 2a90393..197ef56 100644 --- a/examples/jalviewLiteJs.html +++ b/examples/jalviewLiteJs.html @@ -215,11 +215,21 @@ public String getAlignmentFrom(AlignFrame alf, String format) public String getAlignmentFrom(AlignFrame alf, String format, String suffix) // add the given features or annotation to the current alignment +// if features are loaded, feature display is automatically enabled public void loadAnnotation(String annotation) // add the given features or annotation to the given alignment view +// if features are loaded, feature display is automatically enabled public void loadAnnotationFrom(AlignFrame alf, String annotation) +// parse the given string as a jalview or GFF features file and optionally enable feature display on the current alignment +// (v2.7.1) +public abstract void loadFeatures(String features, boolean autoenabledisplay) + +// parse the given string as a jalview or GFF features file and optionally enable feature display on the given alignment +// (v2.7.1) +public abstract void loadFeaturesFrom(AlignFrame alf, String features, boolean autoenabledisplay) + // get the sequence features in the given format (Jalview or GFF) public String getFeatures(String format) @@ -246,6 +256,8 @@ public AlignFrame newViewFrom(AlignFrame alf) public AlignFrame newViewFrom(AlignFrame alf, String name) // load a new alignment +// remember to store the AlignFrame object reference +// if you want to manipulate the new alignment view. public AlignFrame loadAlignment(String text, String title)