X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc1c4cA_.45.alig.txt;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc1c4cA_.45.alig.txt;h=5296203a4f7d2f3a53df7a4dfa69409aff33bec9;hb=c51dbe7933683b64548f5353e67561d2b5e377f7;hp=0000000000000000000000000000000000000000;hpb=12d4dfa00a5e93ae1de1d8409c6d5ca2bc8af13f;p=jalview.git

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/c1c4cA_.45.alig.txt b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c1c4cA_.45.alig.txt
new file mode 100644
index 0000000..5296203
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c1c4cA_.45.alig.txt
@@ -0,0 +1,26 @@
+45 c1c4cA_ Probab=98.63   E-value=2.2e-07  Score=63.32  Aligned_columns=70  Identities=26%
+
+Q ss_pred             EEEEECCCEEEEEECCCCCHHHHHHHCCCCCEECC-------CCCCCCCCCEEEECCCCC
+Q ss_conf             99992697299996799828999998789700023-------378587671799414211
+Q FER_CAPAN_1-14   52 VKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSC-------RAGSCSSCAGKIAGGAVD  104 (144)
+Q Consensus        52 V~~~~~~g~~~~~~~~~~tiLdaa~~aGi~l~~sC-------r~G~CgtC~~~v~~G~v~  104 (144)
+                      |+++-.+  .++++++|+|||||++++||++|+=|       +.|.|+.|.+.|      
+T Consensus         2 v~i~IdG--~~v~v~~g~TILeaa~~~gi~IP~LC~~~~l~~~~G~Cr~C~Vev------   53 (574)
+T c1c4cA_           2 KTIIING--VQFNTDEDTTILKFARDNNIDISALCFLNNCNNDINKCEICTVEV------   53 (574)
+T ss_dssp             EEEEETT--EEEEECCCCBHHHHHHHTSCCCCCSSCBTTBCCSSSCCCTTEEEE------
+T ss_pred             CEEEECC--EEEEECCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEE------
+T ss_conf             3799999--999948876389999984899872110677888703122048998------
+
+
+Q ss_pred             CCCCCCCCHHHHCCCEEEEEEEEECCCEEEEECCHH
+Q ss_conf             566666897683497599643245067699924845
+Q FER_CAPAN_1-14  105 QTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEA  140 (144)
+Q Consensus       105 ~~~~~~l~~~~~~~g~vL~C~s~p~sDv~Ie~~~e~  140 (144)
+                                 .....+++|.+.+...++|.|+.+.
+T Consensus        54 -----------~G~~l~~AC~t~v~~GM~V~T~s~~   78 (574)
+T c1c4cA_          54 -----------EGTGLVTACDTLIEDGMIINTNSDA   78 (574)
+T ss_dssp             -----------TTTEEEETTSCBCCTTCEEESSCSH
+T ss_pred             -----------CCCCCCHHHCCCCCCCCEEEECCHH
+T ss_conf             -----------7887311203268798999819989
+
+