X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc2fugC_.46.alig.txt;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fc2fugC_.46.alig.txt;h=6b978a41751c2eb19b05c44ce63d3b38afdd8975;hb=c51dbe7933683b64548f5353e67561d2b5e377f7;hp=0000000000000000000000000000000000000000;hpb=12d4dfa00a5e93ae1de1d8409c6d5ca2bc8af13f;p=jalview.git

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/c2fugC_.46.alig.txt b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c2fugC_.46.alig.txt
new file mode 100644
index 0000000..6b978a4
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/c2fugC_.46.alig.txt
@@ -0,0 +1,26 @@
+46 c2fugC_ Probab=98.27   E-value=4.6e-06  Score=55.78  Aligned_columns=72  Identities=25%
+
+Q ss_pred             EEEEECCCEEEEEECCCCCHHHHHHHCCCCCEECCC------CCCCCCCCEEE--ECCCC
+Q ss_conf             999926972999967998289999987897000233------78587671799--41421
+Q FER_CAPAN_1-14   52 VKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSCR------AGSCSSCAGKI--AGGAV  103 (144)
+Q Consensus        52 V~~~~~~g~~~~~~~~~~tiLdaa~~aGi~l~~sCr------~G~CgtC~~~v--~~G~v  103 (144)
+                      |+|+-.+.  ++++++|+|||+||+++||+||+=|-      .|.|-.|.+.+  ++|. 
+T Consensus         2 v~~~Idg~--~~~~~~g~~il~aa~~~gi~iP~~C~~~~l~~~g~CR~C~Ve~~~~~~~-   58 (737)
+T c2fugC_           2 VRVKVNDR--IVEVPPGTSVMDAVFHAGYDVPLFCSEKHLSPIGACRMCLVRIGLIQWQ-   58 (737)
+T ss_dssp             EEEECSSC--EEEECTTCBHHHHHHHHTCCCCCCSCCTTSCCCSCSTTSEEEEECCCBC-
+T ss_pred             EEEEECCE--EEEECCCCCHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCC-
+T ss_conf             09999999--9995888768899998689646020069888555012689996176889-
+
+
+Q ss_pred             CCCCCCCCCHHHHCCCEEEEEEEEECCCEEEEECCHH
+Q ss_conf             1566666897683497599643245067699924845
+Q FER_CAPAN_1-14  104 DQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEA  140 (144)
+Q Consensus       104 ~~~~~~~l~~~~~~~g~vL~C~s~p~sDv~Ie~~~e~  140 (144)
+                                    ...+.+|.+.....++|.|+.+.
+T Consensus        59 --------------~~~~~sC~t~v~~gm~v~t~s~~   81 (737)
+T c2fugC_          59 --------------PKLAASCVTAVADGMVVDTLSDV   81 (737)
+T ss_dssp             --------------SSCEETTTCBCCTTCEEESCCHH
+T ss_pred             --------------CCCCCCCCCCCCCCCEEEECCHH
+T ss_conf             --------------85400016257898899928989
+
+