X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd1ep3b2.78.alig.html;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd1ep3b2.78.alig.html;h=42ede267c98d740f39d78290245d16a285553f92;hb=c51dbe7933683b64548f5353e67561d2b5e377f7;hp=0000000000000000000000000000000000000000;hpb=12d4dfa00a5e93ae1de1d8409c6d5ca2bc8af13f;p=jalview.git diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1ep3b2.78.alig.html b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1ep3b2.78.alig.html new file mode 100644 index 0000000..42ede26 --- /dev/null +++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d1ep3b2.78.alig.html @@ -0,0 +1,197 @@ + +Phyre 2 alignment of FER_CAPAN_1-144 with d1ep3b2 + + + + + + + + + + +
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Return to main resultsRetrieve Phyre Job Id +
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Job DescriptionFER_CAPAN_1-144
Confidence93.84%DateWed Jan 4 12:02:18 GMT 2017
Rank78Aligned Residues26
% Identity15%Templated1ep3b2
SCOP infoFerredoxin reductase-like, C-terminal NADP-linked domain +Ferredoxin reductase-like, C-terminal NADP-linked domain +Dihydroorotate dehydrogenase B, PyrK subunit +
Resolution2.10
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  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment
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  80.........90.........100.....
Predicted Secondary structure 
Query SS confidence 
Query Sequence HDLPYSCRAGSCSSCAGKIAGGAVDQ
Query Conservation 
 
  
 
 
   
  
 
  
Alig confidence 
Template Conservation 
  
 
 
 
 
      
    
Template Sequence MESRMACGIGACYACVEHDKEDESHA
Template Known Secondary structure 
SSSSSSS
TTTT
Template Predicted Secondary structure 
Template SS confidence 
  220.........230.........240.....
 
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Download:Text versionFASTA version

No model constructed - rank, confidence too low

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Phyre is for non-commercial use only

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Commercial users please contact Michael Sternberg

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols +10, 845-858 (2015) + [paper] + [Citation + link]
 
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© Structural Bioinformatics Group, Imperial College, London
Lawrence +Kelley, Michael Sternberg 
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