X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd2piaa3.21.alig.txt;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd2piaa3.21.alig.txt;h=d2d6dc78eeb0880bab28ae0e833ecbb973711118;hb=207b06de28859536277608ad94897eaa526b1279;hp=0000000000000000000000000000000000000000;hpb=8537d486848be3e97578248dae6bede12e343fe1;p=jalview.git

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/d2piaa3.21.alig.txt b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d2piaa3.21.alig.txt
new file mode 100644
index 0000000..d2d6dc7
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d2piaa3.21.alig.txt
@@ -0,0 +1,26 @@
+21 d2piaa3 Probab=99.86   E-value=1.5e-21  Score=143.92  Aligned_columns=95  Identities=25%
+
+Q ss_pred             CCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCEECCCCCCCCCCCEE
+Q ss_conf             135677666640899999269729999679982899999878970002337858767179
+Q FER_CAPAN_1-14   38 SANGGKVTCMASYKVKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGK   97 (144)
+Q Consensus        38 ~~~~~~~~~~~~~~V~~~~~~g~~~~~~~~~~tiLdaa~~aGi~l~~sCr~G~CgtC~~~   97 (144)
+                      .+..........|+|+|...+.  +|++++|+||||+++++|+++||+||.|.||+|+++
+T Consensus         3 ~~~~~~~~~~~~~~V~~~~~g~--~~~~~~~~tlL~aa~~~gi~ip~~C~~G~Cg~C~v~   60 (98)
+T d2piaa3           3 GATNTNARENTPFTVRLSRSGT--SFEIPANRSILEVLRDANVRVPSSCESGTCGSCKTA   60 (98)
+T ss_dssp             CCCCCCCSCCCCEEEEETTTCC--EEEECTTSCHHHHHHHTTCCCCCSCSSSSSCTTEEE
+T ss_pred             CCCCCCCCCCCCEEEEEECCCE--EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEE
+T ss_conf             7788877898658999922997--999889985889999879987740787616511269
+
+
+Q ss_pred             EECCCCCCCCCCCCCHHHHCCCEEEEEEEEECC-CEEEEE
+Q ss_conf             941421156666689768349759964324506-769992
+Q FER_CAPAN_1-14   98 IAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQS-DVTIET  136 (144)
+Q Consensus        98 v~~G~v~~~~~~~l~~~~~~~g~vL~C~s~p~s-Dv~Ie~  136 (144)
+                      |++|+|++.+.....++  .+||+|+|+++|.| |++||+
+T Consensus        61 v~sG~v~~~~~~~~~~e--~~~~~l~C~s~~~s~~ividl   98 (98)
+T d2piaa3          61 LCSGEADHRDMVLRDDE--KGTQIMVCVSRAKSAELVLDL   98 (98)
+T ss_dssp             EEESCEECCCSSCCTTT--TTTEEETTTCEESSSEEEECC
+T ss_pred             EEECCEECCCCCCCHHH--HCCEEEEEEEEECCCEEEEEC
+T ss_conf             85074222555778488--298389756553797089969
+
+