X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd3c8ya2.44.alig.txt;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Faligs%2Fd3c8ya2.44.alig.txt;h=6315cf7c4fcdffd7a78d40a2402498c42c62f5f7;hb=c51dbe7933683b64548f5353e67561d2b5e377f7;hp=0000000000000000000000000000000000000000;hpb=12d4dfa00a5e93ae1de1d8409c6d5ca2bc8af13f;p=jalview.git

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/aligs/d3c8ya2.44.alig.txt b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d3c8ya2.44.alig.txt
new file mode 100644
index 0000000..6315cf7
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/aligs/d3c8ya2.44.alig.txt
@@ -0,0 +1,26 @@
+44 d3c8ya2 Probab=98.66   E-value=1.8e-07  Score=63.81  Aligned_columns=70  Identities=26%
+
+Q ss_pred             EEEEECCCEEEEEECCCCCHHHHHHHCCCCCEECC-------CCCCCCCCCEEEECCCCC
+Q ss_conf             99992697299996799828999998789700023-------378587671799414211
+Q FER_CAPAN_1-14   52 VKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSC-------RAGSCSSCAGKIAGGAVD  104 (144)
+Q Consensus        52 V~~~~~~g~~~~~~~~~~tiLdaa~~aGi~l~~sC-------r~G~CgtC~~~v~~G~v~  104 (144)
+                      |+|+..+  .++++++|+|||+|++++||++|+-|       ..|.|+.|.+.|      
+T Consensus         2 V~itIdG--~~v~~~~g~til~a~~~~gi~IP~lC~~~~l~~~~G~C~~C~Vev------   53 (126)
+T d3c8ya2           2 KTIIING--VQFNTDEDTTILKFARDNNIDISALCFLNNCNNDINKCEICTVEV------   53 (126)
+T ss_dssp             EEEEETT--EEEEECCCCBHHHHHHHTTCCCCCSSCBTTBCCSSSCCCTTEEEE------
+T ss_pred             CEEEECC--EEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE------
+T ss_conf             1899999--999938978589999976997555575446677878887508999------
+
+
+Q ss_pred             CCCCCCCCHHHHCCCEEEEEEEEECCCEEEEECCHH
+Q ss_conf             566666897683497599643245067699924845
+Q FER_CAPAN_1-14  105 QTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEA  140 (144)
+Q Consensus       105 ~~~~~~l~~~~~~~g~vL~C~s~p~sDv~Ie~~~e~  140 (144)
+                                 ...+.+-+|.+.+...++|+|..+.
+T Consensus        54 -----------~g~~~v~AC~t~v~~GM~V~T~s~~   78 (126)
+T d3c8ya2          54 -----------EGTGLVTACDTLIEDGMIINTNSDA   78 (126)
+T ss_dssp             -----------TTTEEEEGGGCBCCTTCEEESSCHH
+T ss_pred             -----------CCCCCCCCCCEECCCCCEEEECCHH
+T ss_conf             -----------8798211011176699999929989
+
+