Phyre 2 Results for FER_CAPAN

X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Fss_summary.html;fp=examples%2Ftestdata%2Fphyre2results%2F56da5616b4559c93%2Fss_summary.html;h=aa75543342229d840d26635d98007a2251423a6d;hb=207b06de28859536277608ad94897eaa526b1279;hp=0000000000000000000000000000000000000000;hpb=8537d486848be3e97578248dae6bede12e343fe1;p=jalview.git diff --git a/examples/testdata/phyre2results/56da5616b4559c93/ss_summary.html b/examples/testdata/phyre2results/56da5616b4559c93/ss_summary.html new file mode 100644 index 0000000..aa75543 --- /dev/null +++ b/examples/testdata/phyre2results/56da5616b4559c93/ss_summary.html @@ -0,0 +1,87 @@ +Phyre 2 Results for FER_CAPAN_1-144 + + +

+ + + +

Email	tcnofoegbu@dundee.ac.uk
Description	FER_CAPAN_1-144
Date	Wed Jan 4 12:02:18 GMT 2017
Unique Job ID	56da5616b4559c93

Secondary structure and disorder prediction

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60
Sequence M A S V S A T M I S T S F M P R K P A V T S L K P I P N V G E A L F G L K S A N G G K V T C M A S Y K V K L I T P D G P
Secondary structure
SS confidence
Disorder ? ?
? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
Disorder confidence

. . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120
Sequence I E F D C P D N V Y I L D Q A E E A G H D L P Y S C R A G S C S S C A G K I A G G A V D Q T D G N F L D D D Q L E E G W
Secondary structure
SS confidence
Disorder
? ? ? ? ? ? ?
Disorder confidence

. . . . . . . . . 130 . . . . . . . . . 140 . . . .
Sequence V L T C V A Y P Q S D V T I E T H K E A E L V G
Secondary structure
SS confidence
Disorder
? ?
? ? ? ?
Disorder confidence

+ + + + + + + + + + + +
Confidence Key
High(9) Low (0)
+ + + + +
? Disordered ( 37%)
Alpha helix ( 25%)
Beta strand ( 25%)

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence	M	A	S	V	S	A	T	M	I	S	T	S	F	M	P	R	K	P	A	V	T	S	L	K	P	I	P	N	V	G	E	A	L	F	G	L	K	S	A	N	G	G	K	V	T	C	M	A	S	Y	K	V	K	L	I	T	P	D	G	P
Secondary structure
SS confidence
Disorder	?	?									?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence

	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence	I	E	F	D	C	P	D	N	V	Y	I	L	D	Q	A	E	E	A	G	H	D	L	P	Y	S	C	R	A	G	S	C	S	S	C	A	G	K	I	A	G	G	A	V	D	Q	T	D	G	N	F	L	D	D	D	Q	L	E	E	G	W
Secondary structure
SS confidence
Disorder																																														?	?	?	?	?	?	?
Disorder confidence

	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Sequence	V	L	T	C	V	A	Y	P	Q	S	D	V	T	I	E	T	H	K	E	A	E	L	V	G
Secondary structure
SS confidence
Disorder																		?	?		?	?	?	?
Disorder confidence