X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples%2Ftestdata%2Fsimplegff3.gff;fp=examples%2Ftestdata%2Fsimplegff3.gff;h=2ac54218764bccef1bd5ce9b8a7bb03d2d62bc0f;hb=147dc97563bc25232fdb45a2fe2c149332a4faf7;hp=0000000000000000000000000000000000000000;hpb=fe9a5fd35b336b3ddd45e016d66bf5203f47c047;p=jalview.git diff --git a/examples/testdata/simplegff3.gff b/examples/testdata/simplegff3.gff new file mode 100644 index 0000000..2ac5421 --- /dev/null +++ b/examples/testdata/simplegff3.gff @@ -0,0 +1,19 @@ +##gff-version 2 +##source-version exonerate:protein2genome:local 2.2.0 +##date 2015-01-16 +##type DNA +# +# +# seqname source feature start end score strand frame attributes +# +seq1 exonerate:protein2genome:local gene 8 11 3652 - . gene_id 0 ; sequence seq2 ; gene_orientation . +seq1 exonerate:protein2genome:local cds 9 11 . - . +seq1 exonerate:protein2genome:local exon 9 11 . - . insertions 3 ; deletions 6 +seq1 exonerate:protein2genome:local similarity 8 11 3652 - . alignment_id 0 ; Query seq2 ; Align 11 1 3 +##FASTA +>seq1 +ACTACGACACGACGACGACGACG +>seq2 +CDEQEATGTQDAQEQAQC + +