X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=examples-jbake%2Ftemplates%2Fjvl_formComplete.ftl;fp=examples-jbake%2Ftemplates%2Fjvl_formComplete.ftl;h=97318b423ada20f368330c5d57f01e08ba0ca60e;hb=bb08578d55de6f432ffc5b2bd339467978ede1f4;hp=0000000000000000000000000000000000000000;hpb=1f33d994434b16b0c2a9bcfa32ec7eaf32ca19cc;p=jalview.git

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+<strong>Using the <a href="jalviewLiteJs.html">JalviewLite API</a> to fill out forms using data from JalviewLite<br/></strong>
+Click the Javascript buttons below to interact with the Applet
+instance on the page.<br/>
+View the source in your browser to see how it has been done. <br/>
+<a name="api">View the full <a href="jalviewLiteJs.html">JalviewLite API documentation</a>.</a>
+<applet code="jalview.bin.JalviewLite" width="0" height="0"
+	archive="${content.jvl}" name="Jalview">
+  <#if content.permissions?exists><param name="permissions" value="${content.permissions}"/></#if>
+  <param name="file" value="plantfdx.fa"/>
+  <param name="features" value="plantfdx.features"/>
+  <param name="wrap" value="true"/>
+  <param name="showAnnotation" value="false"/>
+  <param name="windowHeight" value="500"/>
+  <param name="windowWidth" value="650"/>
+  <param name="showFullId" value="false"/>
+  <param name="linkLabel_1" value="Uniprot"/>
+  <param name="linkUrl_1"
+	 value="http://www.uniprot.org/uniprot/$SEQUENCE_ID$"/>
+  <param name="linkLabel_2" value="Expasy">
+  <param name="linkUrl_2"
+	 value="http://us.expasy.org/cgi-bin/niceprot.pl?$SEQUENCE_ID$"/>
+  <param name="hidefeaturegroups" value="uniprot" />
+  <param name="showbutton" value="false" />
+</applet>
+<form name="exampleForm"><br/>
+  <br/>
+  <center><strong>Using the Jalview Applet for Input
+      to an HTML Form</strong></center>
+  <div align="center"><input type="button"
+			     onClick="document.forms.exampleForm.exampleTextarea.value=document.applets.Jalview.getAlignment('fasta', 'false')"
+			     value="Fill Form from Jalview" /> <br/>
+    <br/>
+    <textarea name="exampleTextarea" cols="55" rows="9"></textarea></div>
+</form>
+<center><strong>Make a new View and Get and Set
+    Group Display List</strong></center>
+<form name="groupForm">
+  <div align="center"><input type="button"
+			     onClick="document.forms.groupForm.groups.value=document.applets.Jalview.getFeatureGroups()"
+			     value="Get groups" /> <input type="button"
+							  onClick="document.applets.Jalview.newView()" value="new View" /> <br/>
+    <textarea name="groups" cols="55" rows="9"></textarea> <br/>
+    <input type="button"
+	   onClick="document.applets.Jalview.setFeatureGroupState(document.forms.groupForm.groups.value, true)"
+	   value="Display groups" /> <input type="button"
+					    onClick="document.applets.Jalview.setFeatureGroupState(document.forms.groupForm.groups.value, false)"
+					    value="Hide groups" /></div>
+</form>
+</div>