X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Faptx%2Faptx_configuration_files%2F_aptx_configuration_file_1;h=a2ee8bf68609da7842de9b3ffd3040622ee73fbb;hb=09e03be003bce073d48b4a7e0b1d9b088aafa8a3;hp=2e2896e7803479c3712af2abba02e0d89b2172a3;hpb=b71c86ae1bf40ad42f9d90fd27b4ea32df41eec4;p=jalview.git

diff --git a/forester/aptx/aptx_configuration_files/_aptx_configuration_file_1 b/forester/aptx/aptx_configuration_files/_aptx_configuration_file_1
index 2e2896e..a2ee8bf 100644
--- a/forester/aptx/aptx_configuration_files/_aptx_configuration_file_1
+++ b/forester/aptx/aptx_configuration_files/_aptx_configuration_file_1
@@ -125,7 +125,6 @@ font_family:                               Arial,Helvetica,Verdana,Tahoma,Dialog
 font_size:                                 10
 antialias_screen:                          yes
 show_scale:                                yes
-show_branch_length_values:                 no
 cladogram_type:                            ext_node_sum_dep
 phylogeny_graphics_type:                   rectangular
 node_label_direction:                      horizontal
@@ -201,10 +200,12 @@ show_taxonomy_common_names:     nodisplay no
 show_taxonomy_images:           nodisplay no
 show_annotations:               nodisplay no
 write_confidence_values:        display   ?
+write_branch_length_values:     display   no
 write_events:                   nodisplay no
 use_visual_styles:              display   no
 width_branches:                 display   no
 show_domain_architectures:      nodisplay no
+show_msa:                       nodisplay no
 show_binary_characters:         nodisplay no
 show_binary_character_counts:   nodisplay no
 display_internal_data:          display   yes