X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fdata%2Ftol_156.xml;h=80141c2c3e22fbf96d940e341f7df3900589cc13;hb=4e1878f8b3c7dbff20ae4cd834b0ffd917f3ad72;hp=13d68de5d87c97bafe72ec0465e652f8159054d5;hpb=4c29f4d0aafdf3d4403de105111ce2926e558269;p=jalview.git
diff --git a/forester/data/tol_156.xml b/forester/data/tol_156.xml
index 13d68de..80141c2 100644
--- a/forester/data/tol_156.xml
+++ b/forester/data/tol_156.xml
@@ -1031,44 +1031,97 @@
- 8353
- Xenopus
- genus
+ 8342
+ Anura
+ order
- 8355
- XENLA
- Xenopus laevis
- Daudin, 1802
- African clawed frog
- Bufo laevis
- species
- http://upload.wikimedia.org/wikipedia/commons/e/e3/Xenopus_laevis.jpg
+ 8353
+ Xenopus
+ genus
+
+
+ 8355
+ XENLA
+ Xenopus laevis
+ Daudin, 1802
+ African clawed frog
+ Bufo laevis
+ species
+ http://upload.wikimedia.org/wikipedia/commons/e/e3/Xenopus_laevis.jpg
+
+
+
+
+ 8364
+ XENTR
+ Xenopus tropicalis
+ Western clawed frog
+ Silurana tropicalis
+ species
+ http://genoweb.univ-rennes1.fr/OGP/xenopus%20tropicalis.jpg
+
+
- 8364
- XENTR
- Xenopus tropicalis
- Western clawed frog
- Silurana tropicalis
+ 8384
+ BUFBU
+ Bufo bufo
+ European toad
species
- http://genoweb.univ-rennes1.fr/OGP/xenopus%20tropicalis.jpg
+ http://www.naturephoto-cz.com/photos/others/common-toad-22611.jpg
- 54263
- MESAL
- Mesotriton alpestris
- Alpine newt
- Ichthyosaura alpestris
- species
- http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0403/0436.jpeg
+ 8293
+ Caudata
+ order
+
+
+ 1331674
+ Pleurodelinae
+ subfamily
+
+
+
+ 54263
+ MESAL
+ Mesotriton alpestris
+ Alpine newt
+ Ichthyosaura alpestris
+ Mesotriton alpestris
+ species
+ http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0403/0436.jpeg
+
+
+
+
+ 8316
+ NOTVI
+ Notophthalmus viridescens
+ Eastern newt
+ Triturus viridescens
+ species
+ http://www.jeffpippen.com/herps/enewt120908-9654sandybottomz.jpg
+
+
+
+
+
+ 8341
+ SIRIN
+ Siren intermedia
+ Lesser siren
+ species
+ http://us.i1.yimg.com/us.yimg.com/i/ligans/animals/m/ar0181_1m.jpg
+
+
@@ -1526,9 +1579,13 @@
50557
Insecta
- true insects
class
+
+ Advances in Insect Phylogeny at the Dawn of the Postgenomic Era
+
+
+
33340
@@ -1539,12 +1596,18 @@
33392
Endopterygota
+ Holometabola
infraclass
- Hymenoptera & Lepidoptera & Diptera
+ Mecopterida & Neuropteroidea
- Lepidoptera & Diptera
+
+ Mecopterida
+
+
+ The position of the Hymenoptera within the Holometabola as inferred from the mitochondrial genome of Perga condei
+
7147
@@ -1759,8 +1822,8 @@
- 104431
- Obtectomera
+ 37567
+ Ditrysia
@@ -1787,97 +1850,176 @@
- 7400
- Apocrita
- wasps, ants and bees
+ 41088
+ Cucujiformia
+ infraorder
- 7434
- Aculeata
- suborder
+ 217634
+ ANOGL
+ Anoplophora glabripennis
+ Asian longhorn beetle
+ Anoplophora nobilis
+ species
+ http://bugguide.net/images/cache/WZMLBZXL2Z2HTH4HHR2H3H2HJH9H9Z5LJH5LWZ7LAZSLTH4HPZXHDHKLVZEH9ZEHRRPHJH7LAZPHZR4L3H7H3H9HZR.jpg
+
+
+
+
+ 7070
+ TRICA
+ Tribolium castaneum
+ Red flour beetle
+ species
+ http://upload.wikimedia.org/wikipedia/commons/d/da/Tribolium_castaneum.jpg
+
+
+
+
+
+
+ 7400
+ Apocrita
+ wasps, ants and bees
+
+
+
+ 7434
+ Aculeata
+ suborder
+
+
+
+ 36668
+ Formicidae
+ family
- 36668
- Formicidae
- ants
- family
+ 34695
+ Myrmicinae
+ subfamily
- 143999
- Attini
- tribe
+ 12957
+ ATTCE
+ Atta cephalotes
+ Linnaeus, 1758
+ Leafcutter ant
+ species
+ http://upload.wikimedia.org/wikipedia/commons/4/4e/Leaf-cutting_ant.jpg
-
-
- 12957
- ATTCE
- Atta cephalotes
- Linnaeus, 1758
- Leafcutter ant
- species
- http://upload.wikimedia.org/wikipedia/commons/4/4e/Leaf-cutting_ant.jpg
-
-
-
-
- 103372
- ACREC
- Acromyrmex echinatior
- Forel, 1899
- Panamanian leafcutter ant
- Acromyrmex octospinosus echinatior
- species
- http://hymenopteragenome.org/acromyrmex/sites/hymenopteragenome.org.acromyrmex/files/Acromyrmex_echinatior2.jpg
-
-
- 104421
- CAMFO
- Camponotus floridanus
- Buckley, 1866
- Florida carpenter ant
+ 103372
+ ACREC
+ Acromyrmex echinatior
+ Forel, 1899
+ Panamanian leafcutter ant
+ Acromyrmex octospinosus echinatior
species
- http://bugguide.net/images/cache/5RLH6RRHXRALZZ9LZZ6L3LBLXZBL2RFZHZ9L7ZKH4RDZ3L3Z2RZHKZCLMZKH4R0H6R3Z6RSHMZBL5RRH5ROLKZELLZ.jpg
+ http://hymenopteragenome.org/acromyrmex/sites/hymenopteragenome.org.acromyrmex/files/Acromyrmex_echinatior2.jpg
- 7460
- APIME
- Apis mellifera
- Honeybee
+ 104421
+ CAMFO
+ Camponotus floridanus
+ Buckley, 1866
+ Florida carpenter ant
species
- http://www.floridanature.org/photos/Apis_mellifera_6b_&_Trifolium_sp.,_TBP,_Tallahassee,_20030323.jpg
+ http://bugguide.net/images/cache/5RLH6RRHXRALZZ9LZZ6L3LBLXZBL2RFZHZ9L7ZKH4RDZ3L3Z2RZHKZCLMZKH4R0H6R3Z6RSHMZBL5RRH5ROLKZELLZ.jpg
- 7425
- NASVI
- Nasonia vitripennis
- Parasitic wasp
+ 7460
+ APIME
+ Apis mellifera
+ Honeybee
species
- http://www.freshpond.org/nasonia.jpg
+ http://www.floridanature.org/photos/Apis_mellifera_6b_&_Trifolium_sp.,_TBP,_Tallahassee,_20030323.jpg
+
+
+ 7425
+ NASVI
+ Nasonia vitripennis
+ Parasitic wasp
+ species
+ http://www.freshpond.org/nasonia.jpg
+
+
- 7070
- TRICA
- Tribolium castaneum
- Red flour beetle
- species
- http://upload.wikimedia.org/wikipedia/commons/d/da/Tribolium_castaneum.jpg
+ 33341
+ Orthopteroidea
+ infraclass
+
+
+ 6970
+ Dictyoptera
+ superorder
+
+
+
+ 6973
+ BLAGE
+ Blattella germanica
+ German cockroach
+ Blatta germanica
+ species
+ http://www.biopix.com/photosmedium/Blattella%20germanica%2000017.JPG
+
+
+
+
+ 136037
+ ZOONE
+ Zootermopsis nevadensis
+ Dampwood termite
+ species
+ http://bugguide.net/images/cache/GQA0PQ10VQPK4KAKRKWKSKEKLKWKPQZS5KBK1QCK7KJ05KOK8KAKRK9K4QUK6Q10RKWKHKT02QWKSKEK5Q9KPQD0PQ.jpg
+
+
+
+
+
+ 6993
+ Orthoptera
+ order
+
+
+
+ 7009
+ SCHAM
+ Schistocerca americana
+ American grasshopper
+ species
+ http://bugguide.net/images/cache/BH7HOHIHZRZLAZXLVZQL4ZKL4Z4H6Z4HRRNHLR5HZR2HAHGHAHSLAHKL1H7HDH7H3HUH1ZXLUZGL3H2HAHZLAHXH.jpg
+
+
+
+
+ 51074
+ GRYPE
+ Gryllus pennsylvanicus
+ Field cricket
+ species
+ http://bugguide.net/images/raw/GL9Z5L9Z8LJHWHHR6HRREHVZUHCHIH8Z7HVHMHGZ7HTHQL6ZXHOHWH3H5LUZ7L9ZRLVH5HDHQL.jpg
+
+
+
@@ -1894,6 +2036,32 @@
+ 33351
+ Panheteroptera
+
+
+
+ 7536
+ ONCFA
+ Oncopeltus fasciatus
+ Large milkweed bug
+ species
+ http://bugguide.net/images/cache/309QLSWQT0IKUKSK2KSKUKRKUKGKBKRKNK6QD05QC05Q6KZKPKGQD00K9KGQ2KLKWK8QV0KKO0EQV0EQNK8Q2KGQ10.jpg
+
+
+
+
+ 13249
+ RHOPR
+ Rhodnius prolixus
+ Triatomid bug
+ species
+ http://upload.wikimedia.org/wikipedia/commons/b/b9/Rhodnius_prolixus.jpg
+
+
+
+
+
7029
ACYPI
Acyrthosiphon pisum
@@ -1902,16 +2070,6 @@
http://www.agroatlas.ru/content/pests/Acyrthosiphon_pisum/Acyrthosiphon_pisum.jpg
-
-
- 13249
- RHOPR
- Rhodnius prolixus
- Triatomid bug
- species
- http://upload.wikimedia.org/wikipedia/commons/b/b9/Rhodnius_prolixus.jpg
-
-
@@ -1930,7 +2088,7 @@
568273
Machilis germanica
species
- http://www.naturefg.com/images/c-animals/machilis.jpg
+ http://www.lucianabartolini.net/Immagini/Microcoryphia/Machilis-sp-02.jpg
@@ -2250,7 +2408,7 @@
CAEEL
Caenorhabditis elegans
species
- http://homepages.ed.ac.uk/mbx/C_elegans/N2_picture.gif
+ http://www.easternct.edu/~adams/images/celegansmain.jpg
@@ -2519,7 +2677,7 @@
Acropora digitifera
Staghorn coral
species
- http://www.botany.hawaii.edu/basch/uhnpscesu/htms/NPSAcorl/images/acropori/acrdigitif7.jpg
+ http://mygenomix.files.wordpress.com/2011/07/sn-coral.jpg
@@ -3493,7 +3651,7 @@
Inky cap fungus
Hormographiella aspergillata
strain
- http://upload.wikimedia.org/wikipedia/commons/e/e9/Coprinopsis.cinerea.-.lindsey.jpg
+ http://www.pnas.org/content/107/26/cover-expansion.medium.gif
@@ -4995,7 +5153,6 @@
38254
Glaucocystophyceae
- Glaucophyta
class
@@ -5026,7 +5183,8 @@
Emiliania huxleyi
Pontosphaera huxleyi
species
- http://research.kahaku.go.jp/zoology/kaisei/hp-2/images/hapto.jpg
+ http://www.nhm.ac.uk/resources-rx/images/1049/emiliania-huxleyi-light-microscope-image_68318_1.jpg
+ http://cmore.soest.hawaii.edu/education/kidskorner/images/emiliania_600px.jpg
@@ -5614,11 +5772,28 @@
- 71427
- Allogromia laticollaris
- species
- http://forambarcoding.unige.ch/system/pictures/424/s600/A.laticollaris1.jpg
+ 29178
+ Foraminifera
+ foraminifers
+ class
+
+
+ 71427
+ Allogromia laticollaris
+ species
+ http://forambarcoding.unige.ch/system/pictures/424/s600/A.laticollaris1.jpg
+
+
+
+
+ 46433
+ RETFI
+ Reticulomyxa filosa
+ species
+ http://forambarcoding.unige.ch/system/pictures/269/s600/R.filosa2.jpg
+
+