X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fapplication%2Fdecorator.java;h=2b711a03e7aef30fe1f456f551f591960619b0ba;hb=d30f8d155dee1fbfa17946cf80a203cc886ffdd6;hp=cec430b6a406b98c4dd6cbd275781804a1a2ae5c;hpb=eee996a6476a1e3d84c07f8f690dcde3ff4b2ef5;p=jalview.git diff --git a/forester/java/src/org/forester/application/decorator.java b/forester/java/src/org/forester/application/decorator.java index cec430b..2b711a0 100644 --- a/forester/java/src/org/forester/application/decorator.java +++ b/forester/java/src/org/forester/application/decorator.java @@ -32,6 +32,7 @@ import java.util.List; import java.util.Map; import org.forester.io.parsers.PhylogenyParser; +import org.forester.io.parsers.util.ParserUtils; import org.forester.io.writers.PhylogenyWriter; import org.forester.phylogeny.Phylogeny; import org.forester.phylogeny.data.Identifier; @@ -291,7 +292,7 @@ public final class decorator { Phylogeny[] phylogenies = null; try { final PhylogenyFactory factory = ParserBasedPhylogenyFactory.getInstance(); - final PhylogenyParser pp = ForesterUtil.createParserDependingOnFileType( phylogenies_infile, true ); + final PhylogenyParser pp = ParserUtils.createParserDependingOnFileType( phylogenies_infile, true ); phylogenies = factory.create( phylogenies_infile, pp ); } catch ( final Exception e ) {